AlloSure SNP Error Analysis


J. Collins | 2017-04-11

Table of Contents

1  Init
1.1  function definitions
1.2  pandas display options
1.3  i/o file paths
2  Data structure cleaning
2.1  distribute number of sample results
3  SNP error & background stats

Init

In [1]:
from collections import defaultdict, OrderedDict
from datetime import datetime
from math import log, sqrt
from matplotlib.backends.backend_pdf import PdfPages
from matplotlib.font_manager import FontProperties
from matplotlib.gridspec import GridSpec
from matplotlib.ticker import FuncFormatter
from operator import itemgetter
from scipy.stats import binom, norm, poisson
from tqdm import tqdm
import ggplot
import matplotlib as mpl
import matplotlib.mlab as mlabS
import matplotlib.pyplot as plt
import numpy as np
import os
import pandas as pd
import plotly
import random
import re
import seaborn as sns
import sys
import timeit

sns.set_style('whitegrid')
sns.set(font_scale=1.4)

%matplotlib inline
In [3]:
# from notebook.services.config import ConfigManager
# ConfigManager().update('notebook', {'ExecuteTime': {
#        'display_absolute_timestamps': False,
#        'display_absolute_timings': False,
#     'relative_timing_update_period': .005,
#     'template': {
#         'executed': 'started ${start_time}, finished in ${end_time}-${duration}',
#     }
# }})

function definitions

In [2]:
# * * * ADD CUSTOM FUNCTIONS TO CFDNA_TOOLS MODULE * * *

def print_exec_time(init_time):
    '''Function defintion to track total time taken for 
       a given cell to complete its execution.
    '''
    elapsed = timeit.default_timer() - init_time
    print("Execution time: {} ms ".format(round(elapsed * 1000, 5)))


def mpl_reset():
    '''Undo Seaborn style'''
    del sns
    mpl.rcParams.update(mpl.rcParamsDefault)


def to_percent(y, position):
    '''Print dd-cfDNA labels in percentage.'''
    # Ignore the passed in position. This has the effect of scaling the default
    # tick locations.
    s = str(100 * y)
    # The percent symbol needs escaping in latex
    if mpl.rcParams['text.usetex'] is True:
        return s + r'$\%$'
    else:
        return s + '%'


def strip_all_whitespace(df):
    for col in df.columns:
        if df[col].dtype == object:
            tmp_s = df[col].str.strip()
            df.loc[:, col] = tmp_s
    return df


def convert_result_to_float(df, col_name, div=1):
    def f(x): return float(x) / div
    for col in df.columns:
        if col.endswith(col_name):
            tmp_s = df[col].str.replace('%', '')
            df.loc[:, col] = tmp_s.apply(f)
    return df

def return_numeric(df):
    return df_all.select_dtypes(
                  include=['float64']).dropna(
                                       how='all', 
                                       axis=1)
In [4]:
# def distribute(series, n=100, set_xlim=True, p=97):
#     sns.set_style('white')
#     s = series.dropna()
# #     f,ax1 = plt.subplots(nrows=2, ncols=1, figsize = (8, 8))
#     fig, ax1 = plt.subplots(nrows = 1,
#                             ncols = 1,
#                             figsize = (8, 8))
#     y, x, _ = ax1.hist(
#         s, 
#         bins=n, 
#         normed=True,
#         fc='w', 
#         ec='k', 
#         lw=1.0, 
#         zorder=3, 
#         alpha=0.7,
#         label='{}'.format(
#             s.describe(
#                 percentiles=[0.05,0.1,0.25, 
#                              0.5,0.75, 0.9,
#                              0.95 ])))
#     ax2    =  ax1.twinx()
#     mean   =  s.clip_upper(0.01).median()
#     s_linx =  np.linspace(min(s), 
#                          np.percentile(s, 95), 
#                          100)
#     ax1.plot(s_linx, 
#              norm.pdf(s_linx, 
#                       loc=mean,
#                       scale=s.clip_upper(0.01).std()),
#              '--k', lw=2.0, zorder=5)
#     ax2.plot(s_linx,
#              poisson.pmf(np.arange(100),
#                          mu=mean*(1e2/max(s_linx))),
#              '--', c='maroon', lw=2.0, zorder=6,
#              label="poisson")
# #     if set_xlim:
#     for ax in (ax1,ax2):
#         ax.xaxis.set_ticks_position('bottom')
#         ax.set_xlim(min(s),max(s_linx))
#         ax.spines['top'].set_visible(False)
#         ax.xaxis.set_ticks_position('bottom')
#         ax.tick_params('both', 
#                        width=1, 
#                        which='major',)
# #         ax.spines['right'].set_visible(False)
# #         ax.spines['left'].set_visible(False)
# #         ax1.set_ylim(0, 
# #                      y.max()*1.1)
# #     ax2.set_ylabel('Poisson approx.', 
# #                    color='maroon', 
# #                    labelpad=15)
#     ax.tick_params('y', 
#                     length=15, 
#                     colors='maroon', 
#                     pad=40,)
#     ax1.legend(loc='best', 
#                bbox_to_anchor=(1, 1))
    
# #     ax1.yaxis.set_ticks_position('left')
# #     ax2.yaxis.set_ticks_position('right')
# #     sns.despine(ax=ax1, 
# #                 offset=10, 
# #                 trim=True)
# #     sns.despine(ax=ax2, 
# #                 offset=0.02, 
# #                 trim=True)
#     fig.tight_layout()

['size', 'width', 'color', 'tickdir', 'pad', 'labelsize', 'labelcolor', 'zorder', 'gridOn', 'tick1On', 'tick2On', 'label1On', 'label2On', 'length', 'direction', 'left', 'bottom', 'right', 'top', 'labelleft', 'labelbottom', 'labelright', 'labeltop']

pandas display options

In [4]:
pd.set_option('display.max_columns', 200)
pd.set_option('display.max_colwidth', 50)
pd.set_option('display.max_rows', 50)
pd.set_option('display.width', 100)
In [34]:
# autopep8 -dv -a -a
# pip install jupyter_contrib_nbextensions
# jupyter nbextensions_configurator enable

i/o file paths

In [5]:
# File input pathnames:
# seq01_smpl     = '/Users/jcollins-macbook/Python/cfDNA/stanford/gallo-klvtx/CFDNA_SAMPLE_RESULT_REFLAB_MVW_01102017a.txt'
# seq01_SNP      = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/CFDNA_SNP_RESULT_T1.txt'
# seq01_smpl     = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/CFDNA_SAMPLE_RESULT_REFLAB_MVW_170201.csv'
# seq01_SNP      = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/CFDNA_SNP_RESULT_T1_170201.csv'

seq01_smpl       = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/Datasets/tertiary/170215_all_outputBySample.csv'
KT_smpl          = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/AlloSure--Analytical_Validation/PCR-Multiplexing-project/KT170203_SDU_output_updated 170308.txt'

seq01_SNP        = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/Datasets/tertiary/170215_all_outputBySNP.csv'
# seq01_SNP      = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caman trredx/Datasets/tertiary/CFDNA_SNP_RESULT_T1-2017_output.txt'
DART_lock2_smpls = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/Datasets/dart/DART_28Oct2017lock_eids.csv'
DART_lock2_PIDs  = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/Datasets/dart/DART_28Oct2017lock_eids_sid.csv'
SNP_MiSeq_cov    = '/Users/jcollins-macbook/Documents/iCloud-cfDNA/caredx/AlloSure--Analytical_Validation/PCR-Multiplexing-project/coverage-uniformity/282_amplicons_2X-vs-1X-coverage.csv'
In [6]:
SNP_cov = pd.read_csv(SNP_MiSeq_cov)
SNP_cov.set_index('SNP_ID', inplace=True)
SNP_cov
Out[6]:
Genome_location Ref_start_pos Ref_end_pos rsID SNP_pos_in_ref Ref Alt amp_length SNP_pos SNP_cov_end_bound SNP_cov_type
SNP_ID
IISNP1 chr11_115206646_115207761 501 616 rs10488710 chr11_115206646_115207761:531 C G 116 31 35 False
IISNP10 chr4_46329095_46330254 501 660 rs279844 chr4_46329095_46330254:561 A T 160 61 79 False
IISNP100 chr19_10599851_10600965 501 615 rs1048290 chr19_10599851_10600965:592 G C 115 92 34 False
IISNP101 chr17_33998221_33999330 501 610 rs1049379 chr17_33998221_33999330:582 G C 110 82 29 True
IISNP102 chr1_154744236_154745348 501 613 rs1051614 chr1_154744236_154745348:572 C G 113 72 32 True
IISNP103 chr2_118574685_118575803 501 619 rs1052637 chr2_118574685_118575803:531 C G 119 31 38 False
IISNP104 chr1_236381266_236382387 501 622 rs1055851 chr1_236381266_236382387:560 G C 122 60 41 True
IISNP105 chr20_24939035_24940159 501 625 rs1056033 chr20_24939035_24940159:556 G C 125 56 44 True
IISNP106 chr5_145441622_145442735 501 614 rs1056149 chr5_145441622_145442735:582 G C 114 82 33 True
IISNP107 chr11_17519170_17520279 501 610 rs1064074 chr11_17519170_17520279:573 C G 110 73 29 True
IISNP108 chr2_85769181_85770292 501 612 rs1078004 chr2_85769181_85770292:531 C G 112 31 31 False
IISNP109 chr11_11292148_11293259 501 612 rs10831567 chr11_11292148_11293259:553 G C 112 53 31 True
IISNP11 chr4_169663057_169664186 501 630 rs6811238 chr4_169663057_169664186:559 T G 130 59 49 True
IISNP110 chr10_129899187_129900315 501 629 rs11106 chr10_129899187_129900315:592 G C 129 92 48 False
IISNP111 chr1_75096893_75098000 501 608 rs11210490 chr1_75096893_75098000:534 G C 108 34 27 True
IISNP112 chr7_130020932_130022055 501 624 rs1126899 chr7_130020932_130022055:557 G C 124 57 43 True
IISNP113 chr15_78632267_78633388 501 622 rs1127472 chr15_78632267_78633388:564 C G 122 64 41 True
IISNP114 chr10_24872787_24873906 501 620 rs1127893 chr10_24872787_24873906:583 C G 120 83 39 False
IISNP115 chr5_176862952_176864062 501 611 rs1130857 chr5_176862952_176864062:568 G C 111 68 30 True
IISNP116 chr4_88415067_88416171 501 605 rs1049544 chr4_88415067_88416171:570 G C 105 70 24 True
IISNP117 chr19_44302506_44303626 501 621 rs11547806 chr19_44302506_44303626:561 C G 121 61 40 True
IISNP118 chr12_121416065_121417194 501 630 rs1169289 chr12_121416065_121417194:558 C G 130 58 49 True
IISNP119 chr9_2717972_2719101 501 630 rs12237048 chr9_2717972_2719101:563 C G 130 63 49 True
IISNP12 chr16_78016473_78017602 501 630 rs430046 chr16_78016473_78017602:579 C T 130 79 49 True
IISNP120 chr4_129042633_129043755 501 623 rs12508837 chr4_129042633_129043755:572 C G 123 72 42 True
... ... ... ... ... ... ... ... ... ... ... ...
IISNP77 chr18_22738427_22739556 501 630 rs7229946 chr18_22738427_22739556:575 G A 130 75 49 True
IISNP78 chr10_118506324_118507433 501 610 rs740598 chr10_118506324_118507433:576 G A 110 76 29 True
IISNP79 chr1_14154833_14155962 501 630 rs7520386 chr1_14154833_14155962:570 G A 130 70 49 True
IISNP8 chr21_43606463_43607573 501 611 rs221956 chr21_43606463_43607573:535 T C 111 35 30 True
IISNP80 chr5_159487382_159488507 501 626 rs7704770 chr5_159487382_159488507:572 G A 126 72 45 True
IISNP81 chr17_41341424_41342523 501 600 rs8070085 chr17_41341424_41342523:561 A G 100 61 19 True
IISNP82 chr17_80461344_80462465 501 622 rs8078417 chr17_80461344_80462465:592 C T 122 92 41 False
IISNP83 chr1_239881353_239882471 501 619 rs891700 chr1_239881353_239882471:574 A G 119 74 38 True
IISNP84 chr11_11095660_11096769 501 610 rs901398 chr11_11095660_11096769:562 C T 110 62 29 True
IISNP85 chr13_84456181_84457286 501 606 rs9546538 chr13_84456181_84457286:555 T C 106 55 25 True
IISNP86 chr22_19919790_19920889 501 600 rs9606186 chr22_19919790_19920889:570 C G 100 70 19 True
IISNP87 chr18_29310484_29311587 501 604 rs985492 chr18_29310484_29311587:551 G A 104 51 23 True
IISNP88 chr3_59487752_59488863 501 612 rs9866013 chr3_59487752_59488863:589 T C 112 89 31 False
IISNP89 chr22_33558944_33560052 501 609 rs987640 chr22_33558944_33560052:565 T A 109 65 28 True
IISNP9 chr5_136632784_136633892 501 609 rs13182883 chr5_136632784_136633892:555 G A 109 55 28 True
IISNP90 chr17_2918812_2919921 501 610 rs9905977 chr17_2918812_2919921:582 A G 110 82 29 True
IISNP91 chr2_124108634_124109748 501 615 rs993934 chr2_124108634_124109748:580 A G 115 80 34 True
IISNP92 chr18_9749309_9750416 501 608 rs9951171 chr18_9749309_9750416:571 G A 108 71 27 True
IISNP93 chr7_47924777_47925902 501 626 rs10274334 chr7_47924777_47925902:555 C G 126 55 45 True
IISNP94 chr19_57085220_57086327 501 608 rs10421285 chr19_57085220_57086327:550 G C 108 50 27 True
IISNP95 chr19_41938759_41939869 501 611 rs1043413 chr19_41938759_41939869:539 C G 111 39 30 True
IISNP96 chr1_19447280_19448406 501 627 rs1044010 chr1_19447280_19448406:564 C G 127 64 46 True
IISNP97 chr8_142203762_142204884 501 623 rs1045248 chr8_142203762_142204884:565 C G 123 65 42 True
IISNP98 chr14_31354504_31355624 501 621 rs1045644 chr14_31354504_31355624:593 C G 121 93 40 False
IISNP99 chr11_58318053_58319181 501 629 rs1047979 chr11_58318053_58319181:567 C G 129 67 48 True

282 rows × 11 columns

In [ ]:
# print(sorted(SNP_cov.index.values))
# len(SNP_cov.index.values)
In [21]:
# filtered_all_SNP = all_SNP[all_SNP.SNPPASSQC == True]
# filtered_all_SNP

# SNP_cov_dict = defaultdict(list)
# for SNP, reads in zip(filtered_all_SNP.SNP_NAME, filtered_all_SNP.ALL_READS):
#     SNP_cov_dict[SNP].append(reads)
# # , reverse=True)
# sorted_SNP_cov = sorted(SNP_cov_dict.items(), key=lambda (k, v): np.mean(v))
# for (k, v) in sorted_SNP_cov:
#     print("{}\t{}".format(k, np.mean(v)))
In [7]:
t_init = timeit.default_timer()
all_SNP = pd.read_csv(seq01_SNP, sep='$')#, verbose=True)
all_SNP.info()
all_SNP.set_index('SAMPLE_NAME', inplace=True)
print_exec_time(t_init)

<class 'pandas.core.frame.DataFrame'>
RangeIndex: 3388573 entries, 0 to 3388572
Data columns (total 36 columns):
ID                     float64
RUN_ID                 float64
EXPERIMENT_NAME        object
SAMPLE_NAME            object
AMPLICON_NAME          object
SNP_NAME               object
CHROMOSOME             object
POSITION               float64
REF                    object
ALT                    object
REF_COUNT              float64
ALT_COUNT              float64
REF_FREQ               float64
ALT_FREQ               float64
REF_ALT_READS          float64
ALL_READS              float64
ERR_COUNT              float64
ERR_FREQ_TOTAL         float64
CHROMOSOME_MOCK        object
POSITION_MOCK          float64
DONORFREQUENCY         float64
ALT_FREQ_TOTAL         float64
REF_FREQ_TOTAL         float64
DONORFREQUENCYTOTAL    float64
RECIPIENTALLELE        object
DONORALLELE            object
SUBSTITUTION           object
SNPDIRECTION           object
SAMPLE_PROJECT         float64
UNIQUEID               object
RELATIVE_COVERAGE      float64
REFALTFRACTION         float64
SNPPASSQC              bool
BACKGROUND             float64
ADJUSTEDFREQUENCY      float64
RECIPIENTGENOCALL      object
dtypes: bool(1), float64(21), object(14)
memory usage: 908.1+ MB
Execution time: 23260.77769 ms
In [8]:
t_init = timeit.default_timer()
df_allSmpl = pd.read_csv(seq01_smpl, verbose=True, sep='$')#error_bad_lines=False)
df_allSmpl.sort_index(inplace=True, axis=1)
df_allSmpl.set_index('SAMPLE_NAME', inplace=True)
df_allSmpl = convert_result_to_float(df_allSmpl,'PCT_DD_CFDNA', div=100)
# df_allSmpl = convert_result_to_float(df_allSmpl, 'TOTAL_READS')
df_allSmpl.info(verbose=True)
print_exec_time(t_init) 

Tokenization took: 40.16 ms
Type conversion took: 85.86 ms
Parser memory cleanup took: 0.03 ms
Tokenization took: 25.25 ms
Type conversion took: 65.65 ms
Parser memory cleanup took: 0.01 ms
<class 'pandas.core.frame.DataFrame'>
Index: 16212 entries, HRZ-7-7-8ng-16054E4-400E4 to SL303-Oct-28-15
Data columns (total 103 columns):
AA_BARCODE_NAME                   object
AA_BARCODE_WELL                   object
AA_INDEX                          object
ACCEPTED_BY                       object
ACCEPTED_DATE                     object
ACCESSIONED_BY                    object
ACCESSION_NO                      object
ACCESSION_SESSION_ID              object
ACCESS_ARRAY_NUM                  float64
ANALYSIS_NUM                      object
BC_SESSION_ID                     float64
BLOOD_VOL                         float64
CFDNA_PROCESSED                   object
CFDNA_PROCESS_DATE                float64
CLUSTER_DENSITY                   float64
COLLECTION_DATE                   object
COLLECTION_TIME                   object
COMMENTS                          object
DATE_ACCESSIONED                  object
DATE_SEQUENCED                    object
DAYS_SINCE_COLLECTION             object
DD_CFDNA_PASS_QC_N_DETECT_RPT     object
DESCRIPTION                       float64
DONOR_DNA_SOURCE                  object
DONOR_RELATIONSHIP_DESCRIPTION    object
DONOR_TYPE                        object
EXPERIMENT                        object
EXP_DATE                          object
FRACDETECTABLE                    object
ID                                float64
INVESTIGATOR                      object
LAB                               object
LIBRARY_ID                        float64
LIVING_RELATED                    object
LIVING_RELATED_DESC               object
MANIFEST_BARCODE_LABEL            object
MASS_INPUT                        object
ORGAN                             object
PATIENT                           object
PATIENT_STUDY_ID                  object
PAXGENE_WEIGHT                    float64
PCT_DD_CFDNA                      float64
PCT_DD_CFDNA_PASS_QC              object
PCT_DD_CFDNA_PASS_QC_N_DETECT     object
PCT_SPIKE_DPCR                    float64
PF                                object
PLASMA_INPUT_VOL                  float64
POOL_ID                           float64
PRE_AMP_NUM                       float64
PROCESS_DATE                      object
PROJECT_NAME                      object
QC_BACKGROUND                     object
QC_BACKGROUND_VAL                 object
QC_CONTAM                         object
QC_CONTAM_NON_ZR_RECHOMO_SNPS     object
QC_DD_HIGH                        object
QC_DD_HIGH_PERCENT_RECIPHET       object
QC_LOW_INPUT                      object
QC_LOW_INPUT_2                    object
QC_LOW_INPUT_2_PCT_RECIPHET       object
QC_LOW_INPUT_COVVAR_VALUE         object
QC_RESULT                         object
QC_SUFFICIENT_SNPS                object
QC_SUFFICIENT_SNPS_RECHOMO_NUM    object
RD_SAMPLE_TYPE                    object
READS_PASS_QC                     float64
RECIPIENTHETDIVISION              object
RECIPIENT_DNA_SOURCE              object
REPORTABLE                        object
RND_PROJECT_NAME                  object
RUN_DATE                          object
RUN_ID                            object
RUN_NAME                          object
RUN_QC                            object
SAMPLENAME                        object
SAMPLE_ID                         object
SAMPLE_STATUS                     object
SAMPLE_WELL                       object
SEQUENCER                         object
SNPS_PASS_QC                      float64
SNPS_PASS_QC_PCT                  object
SNPS_RECIPHET                     object
SNPS_RECIPHET_PCT                 object
SNPS_TRIALLELIC                   object
SNPS_TRIALLELIC_PCT               object
SNPS_WITH_INSUFFICIENT_READS      object
SNPS_W_INSUFFICIENT_READS_PCT     object
STATUS                            object
STOCK_DNA_CONC                    float64
STREK_LOT_NUM                     object
STUDY_NAME                        object
TARGETED_PCT_SPIKE                float64
TEST_NAME                         object
TOTAL_READS                       float64
TTP_FILE                          object
TTP_FILE_NUM                      object
TUBE_COMMENTS                     object
TUBE_EID                          object
TUBE_EID_SEQ                      float64
TUBE_SIZE                         object
TUBE_TYPE                         object
TUBE_TYPE_NAME                    object
VISIT_ID                          float64
dtypes: float64(21), object(82)
memory usage: 12.9+ MB
Execution time: 345.58421 ms 

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/IPython/core/interactiveshell.py:2717: DtypeWarning:

Columns (6,7,9,16,36,38,47,51,55,61,64,66,76,79,100,102) have mixed types. Specify dtype option on import or set low_memory=False.
In [10]:
# %time
# f = lambda x: str(round(x/1e6,3))+' M'
# df_allSmpl.TOTAL_READS.apply(f)
In [10]:
# all_SNP.corr().to_csv('all_SNP_pandas_correlation_matrix.csv')
In [9]:
df_all_AV = pd.read_clipboard()
df_all_AV.info()

<class 'pandas.core.frame.DataFrame'>
Int64Index: 180 entries, 645 to 305
Data columns (total 12 columns):
Sample_Name          180 non-null object
Sample_Name_short    180 non-null object
AA_Chip_Number       180 non-null int64
HRZ_Panel            93 non-null float64
Input_ng             93 non-null float64
dd_cfDNA             180 non-null float64
dd_cfDNA_Pass_QC     180 non-null float64
QC_Result            180 non-null object
fracDetectable       180 non-null float64
Is_Streck            180 non-null bool
mean                 1 non-null object
median               1 non-null object
dtypes: bool(1), float64(5), int64(1), object(5)
memory usage: 17.1+ KB
In [10]:
df_all = df_allSmpl[df_allSmpl.index.isin(df_all_AV.Sample_Name)]
df_all.info()

<class 'pandas.core.frame.DataFrame'>
Index: 180 entries, HRZ-8-1-60-Oct-6-15 to Streck0014-Oct-27-15
Columns: 103 entries, AA_BARCODE_NAME to VISIT_ID
dtypes: float64(21), object(82)
memory usage: 146.2+ KB
In [ ]:

Data structure cleaning

In [321]:
# df_all_DART = df_allSmpl[df_allSmpl.STUDY_NAME=='DART']
# df_all_DART.info()
In [9]:
# df_all_KT = df_allSmpl[df_allSmpl.index.str.startswith('KT170203')]
# df_all_KT = pd.read_csv(KT_smpl, sep='\t')
# df_all_KT.info()
# df_allSmpl.QC_RESULT
In [319]:
# series_all_DART = pd.read_csv(DART_lock2_smpls)
# series_all_DART.info()
# all_DART_list = series_all_DART.Sample_Name.values

# ### DART FILTER
# df_all_DART = df_allSmpl[df_allSmpl.index.str.startswith(tuple(series_all_DART.Sample_Name.values))]
# df_all_DART = df_allSmpl[(df_allSmpl['TUBE_EID'].isin(all_DART_list)) & (df_allSmpl.QC_RESULT)]
In [11]:
df_bySNP = all_SNP[all_SNP.index.isin(df_all_AV.Sample_Name)]# & (all_SNP.SNPPASSQC)]
df_bySNP.info(verbose=True)

<class 'pandas.core.frame.DataFrame'>
Index: 46847 entries, HRZ-8-1-60-Oct-1-15 to AVBlank2-Nov-10-15
Data columns (total 35 columns):
ID                     46847 non-null float64
RUN_ID                 46847 non-null float64
EXPERIMENT_NAME        46847 non-null object
AMPLICON_NAME          46847 non-null object
SNP_NAME               46847 non-null object
CHROMOSOME             46847 non-null object
POSITION               46847 non-null float64
REF                    46847 non-null object
ALT                    46847 non-null object
REF_COUNT              46847 non-null float64
ALT_COUNT              46847 non-null float64
REF_FREQ               46847 non-null float64
ALT_FREQ               46847 non-null float64
REF_ALT_READS          46847 non-null float64
ALL_READS              46847 non-null float64
ERR_COUNT              46847 non-null float64
ERR_FREQ_TOTAL         46847 non-null float64
CHROMOSOME_MOCK        46847 non-null object
POSITION_MOCK          46847 non-null float64
DONORFREQUENCY         46847 non-null float64
ALT_FREQ_TOTAL         46847 non-null float64
REF_FREQ_TOTAL         46847 non-null float64
DONORFREQUENCYTOTAL    46847 non-null float64
RECIPIENTALLELE        46847 non-null object
DONORALLELE            46847 non-null object
SUBSTITUTION           46847 non-null object
SNPDIRECTION           46847 non-null object
SAMPLE_PROJECT         0 non-null float64
UNIQUEID               46847 non-null object
RELATIVE_COVERAGE      46847 non-null float64
REFALTFRACTION         46847 non-null float64
SNPPASSQC              46847 non-null bool
BACKGROUND             38067 non-null float64
ADJUSTEDFREQUENCY      38067 non-null float64
RECIPIENTGENOCALL      42832 non-null object
dtypes: bool(1), float64(21), object(13)
memory usage: 12.6+ MB

distribute number of sample results

In [14]:
df_bySNP.groupby('UNIQUEID').describe().unstack()
Out[14]:
ADJUSTEDFREQUENCY ALL_READS ALT_COUNT ALT_FREQ ALT_FREQ_TOTAL BACKGROUND DONORFREQUENCY DONORFREQUENCYTOTAL ERR_COUNT ERR_FREQ_TOTAL ID POSITION POSITION_MOCK REFALTFRACTION REF_ALT_READS REF_COUNT REF_FREQ REF_FREQ_TOTAL RELATIVE_COVERAGE RUN_ID SAMPLE_PROJECT
count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max
UNIQUEID
AVBlank-Aug-20-15 0.0 NaN NaN NaN NaN NaN NaN NaN 261.0 5806.513410 2902.762611 1.0 3419.00 6076.0 8225.00 11373.0 261.0 2773.264368 2813.277600 0.0 11.00 2337.0 4200.00 11351.0 261.0 0.496007 0.384085 0.0 0.001823 0.493609 0.998734 1.0 261.0 0.494812 0.383574 0.0 0.001633 0.492572 0.998116 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 261.0 0.187882 0.223036 0.0 0.000263 0.001520 0.462388 0.499635 261.0 0.187218 0.222339 0.0 0.000263 0.001495 0.461547 0.499416 261.0 21.597701 250.383788 0.0 0.0 2.0 4.00 4017.0 261.0 0.005545 0.043772 0.0 0.000000 0.000243 0.000678 0.472255 261.0 251372.0 75.488410 251242.0 251307.00 251372.0 251437.00 251502.0 261.0 7.582523e+07 6.049297e+07 299411.0 25009441.0 56204945.0 1.241092e+08 247752019.0 261.0 564.850575 15.854042 522.0 555.0 566.0 576.0 597.0 261.0 0.994455 0.043772 0.527745 0.999322 0.999757 1.000000 1.0 261.0 5784.915709 2902.433206 1.0 3417.00 6063.0 8215.00 11367.0 261.0 3011.651341 2959.090143 0.0 8.00 2650.0 4786.00 11164.0 261.0 0.503993 0.384085 0.0 0.001266 0.506391 0.998177 1.0 261.0 0.499643 0.381518 0.0 0.001265 0.505995 0.995895 1.0 261.0 1.019157 0.509492 0.000176 0.600102 1.066457 1.443649 1.996185 261.0 103.0 0.0 103.0 103.0 103.0 103.0 103.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Aug-21-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 9922.400000 5110.151051 10.0 5979.75 10157.5 13955.00 20440.0 260.0 4739.830769 4880.569062 0.0 13.75 3816.5 7254.75 20422.0 260.0 0.497005 0.383689 0.0 0.001383 0.494759 0.998894 1.0 260.0 0.495754 0.383221 0.0 0.001383 0.494343 0.998015 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.187967 0.222454 0.0 0.000170 0.001206 0.455567 0.500000 260.0 0.187207 0.221630 0.0 0.000165 0.001206 0.451719 0.500000 260.0 45.473077 506.379308 0.0 0.0 2.0 6.00 8076.0 260.0 0.005751 0.044539 0.0 0.000000 0.000275 0.000593 0.477051 260.0 243049.5 75.199734 242920.0 242984.75 243049.5 243114.25 243179.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994249 0.044539 0.522949 0.999407 0.999725 1.000000 1.0 260.0 9876.926923 5099.473446 10.0 5977.25 10040.5 13916.00 20426.0 260.0 5137.096154 5013.770347 0.0 11.00 4607.0 8215.75 19483.0 260.0 0.502995 0.383689 0.0 0.001106 0.505241 0.998617 1.0 260.0 0.498495 0.381071 0.0 0.001106 0.504398 0.994485 1.0 260.0 1.023077 0.526896 0.001031 0.616559 1.047318 1.438869 2.107524 260.0 101.0 0.0 101.0 101.0 101.0 101.0 101.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Aug-26-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 7426.242308 4049.628649 18.0 4149.00 7423.5 10639.25 16884.0 260.0 3593.811538 3809.235483 0.0 8.75 2666.5 5394.75 16884.0 260.0 0.496324 0.384040 0.0 0.001074 0.492855 0.999195 1.0 260.0 0.495049 0.383464 0.0 0.001074 0.491744 0.998191 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.187976 0.223081 0.0 0.000186 0.000941 0.465429 0.499725 260.0 0.187279 0.222311 0.0 0.000186 0.000941 0.464283 0.499725 260.0 34.657692 379.009574 0.0 0.0 2.0 5.00 6024.0 260.0 0.005563 0.042809 0.0 0.000000 0.000200 0.000629 0.464600 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994437 0.042809 0.535400 0.999371 0.999800 1.000000 1.0 260.0 7391.584615 4041.831078 18.0 4140.00 7332.0 10564.50 16884.0 260.0 3797.773077 3749.203310 0.0 6.00 3239.0 6229.25 14384.0 260.0 0.503676 0.384040 0.0 0.000805 0.507145 0.998926 1.0 260.0 0.499388 0.381468 0.0 0.000804 0.507096 0.997231 1.0 260.0 1.023077 0.557897 0.002480 0.571587 1.022699 1.465717 2.326026 260.0 106.0 0.0 106.0 106.0 106.0 106.0 106.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Aug-28-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 8469.019231 4706.167871 11.0 4565.00 8616.0 11972.25 19370.0 260.0 4051.323077 4298.955079 0.0 9.75 3302.5 6101.50 17287.0 260.0 0.497414 0.385364 0.0 0.000933 0.495145 0.999191 1.0 260.0 0.496254 0.384934 0.0 0.000933 0.494497 0.997936 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.183301 0.218693 0.0 0.000000 0.000836 0.449351 0.500000 260.0 0.182589 0.217876 0.0 0.000000 0.000835 0.448007 0.499819 260.0 38.284615 426.351184 0.0 0.0 2.0 4.00 6791.0 260.0 0.005564 0.044133 0.0 0.000000 0.000200 0.000488 0.469316 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994436 0.044133 0.530684 0.999512 0.999800 1.000000 1.0 260.0 8430.734615 4698.053089 11.0 4563.25 8566.5 11857.75 19366.0 260.0 4379.411538 4431.282983 0.0 8.00 3620.5 7012.50 18034.0 260.0 0.502586 0.385364 0.0 0.000809 0.504855 0.999067 1.0 260.0 0.498183 0.382778 0.0 0.000809 0.504233 0.998182 1.0 260.0 1.023077 0.568516 0.001329 0.551462 1.040833 1.446275 2.339940 260.0 107.0 0.0 107.0 107.0 107.0 107.0 107.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Aug-31-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 7798.650000 4549.499741 2.0 4136.50 7842.0 11270.50 18243.0 260.0 3766.842308 4065.267909 0.0 6.75 2860.0 5906.50 17495.0 260.0 0.500088 0.384956 0.0 0.001011 0.494859 0.999047 1.0 260.0 0.498937 0.384635 0.0 0.001007 0.493938 0.998291 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.185473 0.221092 0.0 0.000144 0.000942 0.461276 0.500000 260.0 0.184748 0.220404 0.0 0.000143 0.000941 0.461266 0.499534 260.0 36.492308 396.854850 0.0 0.0 1.0 4.00 6290.0 260.0 0.005639 0.044528 0.0 0.000000 0.000141 0.000450 0.470070 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994361 0.044528 0.529930 0.999550 0.999859 1.000000 1.0 260.0 7762.157692 4543.547550 2.0 4132.00 7762.5 11186.50 18228.0 260.0 3995.315385 4094.047724 0.0 7.75 3164.0 6462.00 16676.0 260.0 0.499912 0.384956 0.0 0.000953 0.505141 0.998989 1.0 260.0 0.495424 0.382323 0.0 0.000952 0.503464 0.997440 1.0 260.0 1.023077 0.596833 0.000262 0.542653 1.028764 1.478536 2.393234 260.0 110.0 0.0 110.0 110.0 110.0 110.0 110.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-1-15 239.0 0.191835 0.223568 -0.001816 -0.000153 0.000583 0.457851 0.499617 260.0 6106.646154 3536.553607 14.0 3098.00 6012.0 8669.25 17778.0 260.0 2894.130769 3094.918029 0.0 5.00 2250.5 4353.50 12966.0 260.0 0.495696 0.383738 0.0 0.001019 0.493061 0.998971 1.0 260.0 0.494482 0.383222 0.0 0.001018 0.492225 0.998205 1.0 239.0 0.000431 0.000530 0.000153 0.000153 0.000156 0.000324 0.001816 260.0 0.187902 0.222467 0.0 0.000000 0.001022 0.457395 0.499770 260.0 0.187200 0.221695 0.0 0.000000 0.001022 0.456380 0.499693 260.0 30.888462 302.678619 0.0 0.0 1.5 4.00 4675.0 260.0 0.005629 0.043567 0.0 0.000000 0.000248 0.000674 0.471651 260.0 391.5 75.199734 262.0 326.75 391.5 456.25 521.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994371 0.043567 0.528349 0.999326 0.999752 1.000000 1.0 260.0 6075.757692 3536.696924 14.0 3090.00 5995.0 8631.25 17771.0 260.0 3181.626923 3240.744843 0.0 5.75 2502.0 5199.25 13327.0 260.0 0.504304 0.383738 0.0 0.001029 0.506939 0.998981 1.0 260.0 0.499889 0.381083 0.0 0.001029 0.506769 0.996113 1.0 260.0 1.023077 0.592496 0.002345 0.519023 1.007220 1.452403 2.978437 260.0 200.0 0.0 200.0 200.0 200.0 200.0 200.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-10-15 238.0 0.189407 0.222215 -0.001680 0.000038 0.001195 0.461397 0.499213 260.0 7690.369231 4263.114818 13.0 4110.75 7848.5 11103.00 17021.0 260.0 3694.211538 3906.881530 0.0 13.00 2691.0 5776.00 17019.0 260.0 0.499434 0.384550 0.0 0.002513 0.494752 0.998705 1.0 260.0 0.498225 0.384067 0.0 0.002512 0.494287 0.997350 1.0 238.0 0.000410 0.000471 0.000165 0.000165 0.000181 0.000196 0.001680 260.0 0.185192 0.219983 0.0 0.000291 0.001471 0.457315 0.499394 260.0 0.184493 0.219211 0.0 0.000291 0.001470 0.454024 0.499167 260.0 34.088462 414.262171 0.0 0.0 2.0 4.00 6645.0 260.0 0.005762 0.044975 0.0 0.000000 0.000181 0.000475 0.475662 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994238 0.044975 0.524338 0.999525 0.999819 1.000000 1.0 260.0 7656.280769 4248.167032 13.0 4107.00 7707.5 11094.00 17020.0 260.0 3962.069231 4025.600334 0.0 8.00 3108.0 6452.00 16242.0 260.0 0.500566 0.384550 0.0 0.001295 0.505248 0.997487 1.0 260.0 0.496012 0.381829 0.0 0.001295 0.504573 0.987098 1.0 260.0 1.023077 0.567137 0.001729 0.546868 1.044114 1.477071 2.264364 260.0 219.0 0.0 219.0 219.0 219.0 219.0 219.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-13-15 239.0 0.189418 0.222332 -0.001790 -0.000202 0.000745 0.459070 0.498810 260.0 6204.996154 3576.738384 20.0 3340.00 6188.5 8999.75 13942.0 260.0 2940.915385 3144.484336 0.0 6.75 2308.0 4623.25 13008.0 260.0 0.497735 0.384160 0.0 0.001056 0.499014 0.998803 1.0 260.0 0.496440 0.383610 0.0 0.001054 0.498791 0.997536 1.0 239.0 0.000454 0.000497 0.000193 0.000202 0.000220 0.000220 0.001790 260.0 0.186095 0.220607 0.0 0.000000 0.001062 0.456085 0.499031 260.0 0.185364 0.219812 0.0 0.000000 0.001060 0.454264 0.498873 260.0 26.300000 310.909170 0.0 0.0 2.0 4.00 4992.0 260.0 0.005791 0.044863 0.0 0.000000 0.000248 0.000660 0.473175 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994209 0.044863 0.526825 0.999340 0.999752 1.000000 1.0 260.0 6178.696154 3569.385667 20.0 3336.50 6091.5 8980.00 13936.0 260.0 3237.780769 3410.272290 0.0 6.00 2258.0 5131.00 13426.0 260.0 0.502265 0.384160 0.0 0.001197 0.500986 0.998944 1.0 260.0 0.497769 0.381531 0.0 0.001195 0.499355 0.996655 1.0 260.0 1.023077 0.589731 0.003298 0.550698 1.020357 1.483875 2.298751 260.0 225.0 0.0 225.0 225.0 225.0 225.0 225.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-15-15 229.0 0.186448 0.223095 -0.001792 -0.000173 0.000363 0.462351 0.499541 259.0 6377.482625 3909.242610 10.0 2831.50 6209.0 9456.50 15443.0 259.0 3030.590734 3391.596437 0.0 7.00 2008.0 4812.50 14798.0 259.0 0.496894 0.385144 0.0 0.001025 0.491891 0.999187 1.0 259.0 0.495445 0.384306 0.0 0.001025 0.490050 0.998296 1.0 229.0 0.000438 0.000506 0.000149 0.000173 0.000183 0.000183 0.001792 259.0 0.184176 0.219577 0.0 0.000000 0.000869 0.456890 0.500000 259.0 0.183613 0.219123 0.0 0.000000 0.000869 0.455467 0.500000 259.0 28.077220 317.948660 0.0 0.0 1.0 4.00 5066.0 259.0 0.005735 0.042849 0.0 0.000000 0.000175 0.000561 0.467818 259.0 131.0 74.911058 2.0 66.50 131.0 195.50 260.0 259.0 7.628282e+07 6.049108e+07 299411.0 25102053.0 56423074.0 1.247125e+08 247752019.0 259.0 564.861004 15.888053 522.0 555.0 566.0 576.0 597.0 259.0 0.994265 0.042849 0.532182 0.999439 0.999825 1.000000 1.0 259.0 6349.405405 3902.615765 9.0 2831.50 6182.0 9396.50 15441.0 259.0 3318.814672 3510.303162 0.0 5.50 2471.0 5280.00 15431.0 259.0 0.503106 0.385144 0.0 0.000813 0.508109 0.998975 1.0 259.0 0.498820 0.382540 0.0 0.000813 0.508053 0.996207 1.0 259.0 1.027027 0.629543 0.001610 0.455984 0.999895 1.522871 2.486934 259.0 230.0 0.0 230.0 230.0 230.0 230.0 230.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-2-15 227.0 0.189843 0.222183 -0.001612 0.000274 0.001559 0.461444 0.499764 261.0 5611.896552 3503.018293 2.0 2370.00 5393.0 8768.00 13442.0 261.0 2715.279693 3054.677370 0.0 9.00 2016.0 4037.00 13420.0 261.0 0.497871 0.383421 0.0 0.001771 0.496599 0.998068 1.0 261.0 0.496801 0.383108 0.0 0.001770 0.496599 0.996584 1.0 227.0 0.000406 0.000462 0.000149 0.000172 0.000185 0.000190 0.001674 261.0 0.187683 0.221583 0.0 0.000479 0.001802 0.460337 0.500000 261.0 0.187018 0.220984 0.0 0.000476 0.001801 0.459051 0.500000 261.0 23.214559 297.075489 0.0 0.0 1.0 3.00 4788.0 261.0 0.005602 0.044662 0.0 0.000000 0.000111 0.000612 0.474106 261.0 132.0 75.488410 2.0 67.00 132.0 197.00 262.0 261.0 7.582523e+07 6.049297e+07 299411.0 25009441.0 56204945.0 1.241092e+08 247752019.0 261.0 564.850575 15.854042 522.0 555.0 566.0 576.0 597.0 261.0 0.994398 0.044662 0.525894 0.999388 0.999889 1.000000 1.0 261.0 5588.681992 3492.585675 2.0 2369.00 5391.0 8752.00 13440.0 261.0 2873.402299 3167.194069 0.0 9.00 1944.0 4742.00 12270.0 261.0 0.502129 0.383421 0.0 0.001932 0.503401 0.998229 1.0 261.0 0.497597 0.380727 0.0 0.001931 0.502949 0.996409 1.0 261.0 1.019157 0.636171 0.000363 0.430407 0.979404 1.592326 2.441155 261.0 197.0 0.0 197.0 197.0 197.0 197.0 197.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-22-15 222.0 0.182927 0.221900 -0.001545 -0.000179 0.001086 0.464177 0.499352 260.0 5768.484615 4285.945406 4.0 2168.25 5029.0 8606.75 18280.0 260.0 2770.603846 3380.544242 0.0 7.75 1554.5 4141.50 15745.0 260.0 0.496286 0.385663 0.0 0.001613 0.491601 0.998615 1.0 260.0 0.495226 0.385244 0.0 0.001607 0.490028 0.997235 1.0 222.0 0.000392 0.000424 0.000151 0.000179 0.000186 0.000186 0.001545 260.0 0.184821 0.221423 0.0 0.000095 0.001512 0.462986 0.499504 260.0 0.184183 0.220708 0.0 0.000095 0.001501 0.459655 0.499504 260.0 24.292308 318.029040 0.0 0.0 1.0 3.00 5122.0 260.0 0.005372 0.043594 0.0 0.000000 0.000116 0.000498 0.470556 260.0 4028.5 75.199734 3899.0 3963.75 4028.5 4093.25 4158.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994628 0.043594 0.529444 0.999502 0.999884 1.000000 1.0 260.0 5744.192308 4273.372801 4.0 2168.25 5029.0 8583.25 18255.0 260.0 2973.588462 3670.439053 0.0 5.75 1597.0 4626.00 17605.0 260.0 0.503714 0.385663 0.0 0.001385 0.508399 0.998387 1.0 260.0 0.499402 0.383103 0.0 0.001384 0.508399 0.996742 1.0 260.0 1.023077 0.760139 0.000709 0.384553 0.891925 1.526461 3.242073 260.0 254.0 0.0 254.0 254.0 254.0 254.0 254.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-23-15 227.0 0.187653 0.222912 -0.001584 0.000100 0.001414 0.460511 0.499543 260.0 6344.207692 4345.640552 12.0 2932.75 5748.5 9382.25 20822.0 260.0 3000.465385 3484.745342 0.0 13.50 1980.0 4756.25 16201.0 260.0 0.499501 0.382950 0.0 0.003269 0.497112 0.998330 1.0 260.0 0.498265 0.382422 0.0 0.003263 0.495610 0.997568 1.0 227.0 0.000415 0.000449 0.000156 0.000190 0.000191 0.000191 0.001690 260.0 0.188661 0.222137 0.0 0.000319 0.002002 0.459890 0.499733 260.0 0.188037 0.221573 0.0 0.000308 0.002001 0.459741 0.499603 260.0 33.457692 453.363358 0.0 0.0 1.0 3.00 7298.0 260.0 0.005548 0.044452 0.0 0.000000 0.000191 0.000524 0.473958 260.0 4033.5 75.199734 3904.0 3968.75 4033.5 4098.25 4163.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994452 0.044452 0.526042 0.999476 0.999809 1.000000 1.0 260.0 6310.750000 4310.452063 12.0 2932.25 5722.0 9338.50 20817.0 260.0 3310.284615 3918.321565 0.0 12.00 1859.0 5058.25 19465.0 260.0 0.500499 0.382950 0.0 0.001670 0.502888 0.996731 1.0 260.0 0.496187 0.380425 0.0 0.001668 0.502888 0.992041 1.0 260.0 1.023077 0.700785 0.001935 0.472940 0.927012 1.512996 3.357789 260.0 252.0 0.0 252.0 252.0 252.0 252.0 252.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-26-15 242.0 0.190701 0.223846 -0.001552 0.000031 0.000928 0.463054 0.499262 260.0 8638.676923 4862.598253 14.0 4787.50 8778.5 12668.75 19884.0 260.0 4124.780769 4425.464938 0.0 14.75 3164.5 6691.25 19828.0 260.0 0.497796 0.383208 0.0 0.001412 0.493002 0.998749 1.0 260.0 0.496500 0.382712 0.0 0.001332 0.492696 0.997711 1.0 242.0 0.000414 0.000454 0.000175 0.000175 0.000181 0.000226 0.001552 260.0 0.189280 0.223457 0.0 0.000291 0.001315 0.462858 0.499443 260.0 0.188497 0.222588 0.0 0.000274 0.001275 0.461877 0.499316 260.0 38.773077 390.307213 0.0 0.0 2.0 4.00 6118.0 260.0 0.005737 0.043313 0.0 0.000000 0.000215 0.000526 0.461945 260.0 4027.5 75.199734 3898.0 3962.75 4027.5 4092.25 4157.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994263 0.043313 0.538055 0.999474 0.999785 1.000000 1.0 260.0 8599.903846 4862.539933 14.0 4787.25 8650.5 12667.00 19861.0 260.0 4475.123077 4519.250299 0.0 8.75 3726.5 7388.25 17298.0 260.0 0.502204 0.383208 0.0 0.001251 0.506998 0.998588 1.0 260.0 0.497763 0.380550 0.0 0.001249 0.503407 0.996110 1.0 260.0 1.023077 0.575877 0.001658 0.566983 1.039636 1.500358 2.354858 260.0 256.0 0.0 256.0 256.0 256.0 256.0 256.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-27-15 240.0 0.192163 0.225063 -0.001458 0.000049 0.001293 0.467407 0.498911 261.0 7517.597701 4568.560888 2.0 3965.00 7222.0 11039.00 21734.0 261.0 3523.708812 3858.670061 0.0 14.00 2398.0 5418.00 16922.0 261.0 0.496007 0.383126 0.0 0.001761 0.490741 0.998106 1.0 261.0 0.494697 0.382299 0.0 0.001756 0.489586 0.996527 1.0 240.0 0.000416 0.000436 0.000181 0.000187 0.000209 0.000243 0.001648 261.0 0.189084 0.223072 0.0 0.000293 0.001802 0.459894 0.499748 261.0 0.188628 0.222710 0.0 0.000276 0.001799 0.459894 0.499748 261.0 30.915709 359.466561 0.0 0.0 2.0 4.00 5767.0 261.0 0.005634 0.043450 0.0 0.000000 0.000253 0.000564 0.468671 261.0 4031.0 75.488410 3901.0 3966.00 4031.0 4096.00 4161.0 261.0 7.582523e+07 6.049297e+07 299411.0 25009441.0 56204945.0 1.241092e+08 247752019.0 261.0 564.850575 15.854042 522.0 555.0 566.0 576.0 597.0 261.0 0.994366 0.043450 0.531329 0.999436 0.999747 1.000000 1.0 261.0 7486.681992 4560.144797 2.0 3963.00 7141.0 11036.00 21699.0 261.0 3962.973180 4379.179284 0.0 14.00 2842.0 5907.00 21693.0 261.0 0.503993 0.383126 0.0 0.001894 0.509259 0.998239 1.0 261.0 0.499669 0.380410 0.0 0.001893 0.509259 0.994609 1.0 261.0 1.019157 0.619358 0.000271 0.537533 0.979083 1.496552 2.946468 261.0 258.0 0.0 258.0 258.0 258.0 258.0 258.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-28-15 227.0 0.186255 0.220121 -0.001585 -0.000169 0.001160 0.454382 0.499071 260.0 4592.784615 2878.685504 14.0 2026.75 4710.5 6991.25 10970.0 260.0 2234.138462 2533.569985 0.0 7.50 1586.0 3297.00 10935.0 260.0 0.497788 0.384498 0.0 0.001932 0.492523 0.998882 1.0 260.0 0.496660 0.384230 0.0 0.001932 0.491470 0.997813 1.0 227.0 0.000401 0.000452 0.000158 0.000169 0.000177 0.000177 0.001585 260.0 0.184703 0.219198 0.0 0.000000 0.001667 0.447742 0.499247 260.0 0.183953 0.218481 0.0 0.000000 0.001666 0.446131 0.499247 260.0 17.576923 211.065851 0.0 0.0 0.0 2.00 3385.0 260.0 0.005656 0.045123 0.0 0.000000 0.000000 0.000506 0.472304 260.0 4034.5 75.199734 3905.0 3969.75 4034.5 4099.25 4164.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994344 0.045123 0.527696 0.999494 1.000000 1.000000 1.0 260.0 4575.207692 2875.127608 14.0 2025.75 4586.0 6938.75 10941.0 260.0 2341.069231 2523.500721 0.0 6.00 1500.0 3780.50 10699.0 260.0 0.502212 0.384498 0.0 0.001118 0.507477 0.998068 1.0 260.0 0.497684 0.381937 0.0 0.001118 0.506846 0.996881 1.0 260.0 1.023077 0.641249 0.003119 0.451474 1.049299 1.557353 2.443649 260.0 266.0 0.0 266.0 266.0 266.0 266.0 266.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-29-15 242.0 0.190595 0.222870 -0.001595 -0.000055 0.000946 0.456043 0.499131 260.0 8899.873077 5076.609851 17.0 4960.75 9192.5 12545.25 24328.0 260.0 4276.703846 4546.001192 0.0 11.75 3121.5 6309.50 20646.0 260.0 0.499911 0.384541 0.0 0.001357 0.498377 0.998799 1.0 260.0 0.498706 0.384128 0.0 0.001357 0.497208 0.998028 1.0 242.0 0.000401 0.000454 0.000143 0.000163 0.000177 0.000177 0.001614 260.0 0.186285 0.221527 0.0 0.000209 0.001240 0.455956 0.499307 260.0 0.185550 0.220749 0.0 0.000206 0.001239 0.455526 0.499169 260.0 38.157692 435.617631 0.0 0.0 2.0 4.00 6951.0 260.0 0.005685 0.045291 0.0 0.000000 0.000201 0.000530 0.477207 260.0 4029.5 75.199734 3900.0 3964.75 4029.5 4094.25 4159.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994315 0.045291 0.522793 0.999470 0.999799 1.000000 1.0 260.0 8861.715385 5069.680931 17.0 4951.75 9071.5 12404.50 24321.0 260.0 4585.011538 4658.966465 0.0 8.75 3548.0 7512.25 21305.0 260.0 0.500089 0.384541 0.0 0.001201 0.501623 0.998643 1.0 260.0 0.495609 0.381960 0.0 0.001200 0.501484 0.997553 1.0 260.0 1.023077 0.583577 0.001954 0.570259 1.056716 1.442128 2.796603 260.0 264.0 0.0 264.0 264.0 264.0 264.0 264.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-6-15 242.0 0.187025 0.223097 -0.001776 -0.000191 0.000379 0.459303 0.499526 259.0 9991.432432 6192.234629 4.0 4651.00 9469.0 14128.50 24576.0 259.0 4752.088803 5220.223729 0.0 7.50 3229.0 7344.00 24564.0 259.0 0.496950 0.385155 0.0 0.000988 0.495048 0.998852 1.0 259.0 0.495803 0.384718 0.0 0.000988 0.493165 0.998207 1.0 242.0 0.000450 0.000508 0.000172 0.000191 0.000196 0.000198 0.001776 259.0 0.185739 0.221836 0.0 0.000117 0.001020 0.458512 0.499717 259.0 0.185095 0.221199 0.0 0.000117 0.001020 0.458280 0.499382 259.0 48.065637 618.150266 0.0 0.0 2.0 5.50 9930.0 259.0 0.005592 0.044589 0.0 0.000000 0.000220 0.000538 0.479409 259.0 131.0 74.911058 2.0 66.50 131.0 195.50 260.0 259.0 7.628282e+07 6.049108e+07 299411.0 25102053.0 56423074.0 1.247125e+08 247752019.0 259.0 564.861004 15.888053 522.0 555.0 566.0 576.0 597.0 259.0 0.994408 0.044589 0.520591 0.999462 0.999780 1.000000 1.0 259.0 9943.366795 6157.690901 4.0 4650.00 9469.0 13974.50 24572.0 259.0 5191.277992 5670.239278 0.0 8.00 3743.0 8183.00 24499.0 259.0 0.503050 0.385155 0.0 0.001148 0.504952 0.999012 1.0 259.0 0.498605 0.382560 0.0 0.001148 0.504805 0.996972 1.0 259.0 1.027027 0.636505 0.000411 0.478080 0.973326 1.452279 2.526186 259.0 207.0 0.0 207.0 207.0 207.0 207.0 207.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-7-15 240.0 0.190843 0.224021 -0.001665 0.000183 0.001166 0.462873 0.498322 260.0 6875.676923 4348.949717 9.0 3308.25 6632.0 9964.50 23537.0 260.0 3325.757692 3746.615890 0.0 11.75 2254.5 5388.50 23531.0 260.0 0.497197 0.383612 0.0 0.001702 0.492788 0.998478 1.0 260.0 0.496413 0.383012 0.0 0.001701 0.492339 0.997614 1.0 240.0 0.000434 0.000506 0.000148 0.000167 0.000194 0.000194 0.001692 260.0 0.188044 0.222426 0.0 0.000460 0.001579 0.459356 0.498512 260.0 0.187776 0.222097 0.0 0.000459 0.001578 0.459061 0.498489 260.0 11.334615 58.285010 0.0 0.0 2.0 5.00 646.0 260.0 0.002088 0.010526 0.0 0.000000 0.000312 0.000735 0.117199 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.997912 0.010526 0.882801 0.999265 0.999688 1.000000 1.0 260.0 6864.342308 4349.105111 9.0 3297.25 6627.0 9961.75 23535.0 260.0 3538.584615 3774.213571 0.0 12.00 2745.5 5938.75 17670.0 260.0 0.502803 0.383612 0.0 0.001522 0.507212 0.998298 1.0 260.0 0.501499 0.382372 0.0 0.001521 0.506980 0.989410 1.0 260.0 1.023077 0.647109 0.001339 0.492256 0.986819 1.482683 3.502224 260.0 210.0 0.0 210.0 210.0 210.0 210.0 210.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Oct-8-15 240.0 0.189699 0.222432 -0.001594 0.000065 0.000990 0.460127 0.499735 260.0 8156.292308 4545.517665 3.0 4704.75 8191.5 12057.25 18094.0 260.0 3977.884615 4260.375334 0.0 9.00 2870.0 6248.50 18083.0 260.0 0.498496 0.383769 0.0 0.001731 0.492832 0.998405 1.0 260.0 0.497340 0.383284 0.0 0.001435 0.490310 0.997415 1.0 240.0 0.000437 0.000495 0.000187 0.000187 0.000194 0.000251 0.001773 260.0 0.186713 0.220800 0.0 0.000379 0.001592 0.456511 0.499959 260.0 0.186079 0.220146 0.0 0.000379 0.001549 0.456434 0.499876 260.0 33.888462 393.317146 0.0 0.0 2.0 4.00 6305.0 260.0 0.005335 0.041719 0.0 0.000000 0.000198 0.000547 0.462311 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994665 0.041719 0.537689 0.999453 0.999802 1.000000 1.0 260.0 8122.403846 4534.840335 3.0 4699.75 8143.0 12039.75 18092.0 260.0 4144.519231 4159.170372 0.0 10.75 3155.5 6747.00 16573.0 260.0 0.501504 0.383769 0.0 0.001595 0.507168 0.998269 1.0 260.0 0.497325 0.381189 0.0 0.001595 0.506340 0.996539 1.0 260.0 1.023077 0.570163 0.000376 0.590136 1.027493 1.512390 2.269604 260.0 212.0 0.0 212.0 212.0 212.0 212.0 212.0 0.0 NaN NaN NaN NaN NaN NaN NaN
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AVBlank-Sep-18-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 6376.542308 3275.568234 47.0 3633.75 6594.5 8917.25 13337.0 260.0 3054.623077 3132.330602 0.0 8.00 2556.5 4461.00 13327.0 260.0 0.497676 0.383770 0.0 0.001094 0.490986 0.998765 1.0 260.0 0.496486 0.383269 0.0 0.001093 0.490029 0.998221 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.186907 0.221086 0.0 0.000231 0.001195 0.460074 0.500000 260.0 0.186241 0.220366 0.0 0.000231 0.001195 0.458654 0.499925 260.0 21.661538 245.879104 0.0 0.0 1.0 4.00 3927.0 260.0 0.005490 0.043511 0.0 0.000000 0.000162 0.000529 0.466168 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994510 0.043511 0.533832 0.999471 0.999838 1.000000 1.0 260.0 6354.880769 3278.267629 47.0 3632.50 6548.5 8916.75 13335.0 260.0 3300.257692 3258.856819 0.0 10.00 2698.5 5261.25 11729.0 260.0 0.502324 0.383770 0.0 0.001235 0.509014 0.998906 1.0 260.0 0.498024 0.381195 0.0 0.001235 0.508596 0.997550 1.0 260.0 1.023077 0.525545 0.007541 0.583013 1.058047 1.430718 2.139839 260.0 141.0 0.0 141.0 141.0 141.0 141.0 141.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Sep-4-15 0.0 NaN NaN NaN NaN NaN NaN NaN 261.0 11006.329502 6025.988276 2.0 5767.00 11231.0 15571.00 24230.0 261.0 5329.854406 5570.709247 0.0 11.00 4142.0 8096.00 24215.0 261.0 0.498710 0.384561 0.0 0.000863 0.494498 0.999324 1.0 261.0 0.497574 0.384073 0.0 0.000862 0.494180 0.998145 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 261.0 0.187070 0.222682 0.0 0.000143 0.000758 0.461969 0.499503 261.0 0.186437 0.222004 0.0 0.000141 0.000758 0.461283 0.499338 261.0 52.827586 574.351331 0.0 1.0 2.0 6.00 9136.0 261.0 0.005328 0.041942 0.0 0.000046 0.000235 0.000534 0.456754 261.0 132.0 75.488410 2.0 67.00 132.0 197.00 262.0 261.0 7.633374e+07 6.044730e+07 299411.0 25194665.0 56423074.0 1.253158e+08 247752019.0 261.0 564.816092 15.843850 522.0 555.0 566.0 576.0 597.0 261.0 0.994672 0.041942 0.543246 0.999466 0.999765 0.999954 1.0 261.0 10953.501916 6009.560174 2.0 5762.00 11226.0 15515.00 24223.0 261.0 5623.647510 5605.051318 0.0 8.00 4671.0 9323.00 23359.0 261.0 0.501290 0.384561 0.0 0.000676 0.505502 0.999137 1.0 261.0 0.497099 0.381962 0.0 0.000676 0.505084 0.997764 1.0 261.0 1.019157 0.557991 0.000185 0.534009 1.039961 1.441834 2.243634 261.0 116.0 0.0 116.0 116.0 116.0 116.0 116.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank-Sep-9-15 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 10129.811538 6224.933537 37.0 4864.25 9771.0 14237.50 24742.0 260.0 4827.615385 5190.990019 0.0 9.00 3377.0 7771.25 24532.0 260.0 0.500518 0.383979 0.0 0.000789 0.500022 0.998975 1.0 260.0 0.499255 0.383555 0.0 0.000727 0.499194 0.998140 1.0 0.0 NaN NaN NaN NaN NaN NaN NaN 260.0 0.187302 0.221996 0.0 0.000143 0.000894 0.463071 0.499485 260.0 0.186541 0.221252 0.0 0.000143 0.000894 0.462623 0.499267 260.0 50.219231 560.071591 0.0 0.0 2.0 5.25 8923.0 260.0 0.005356 0.040370 0.0 0.000000 0.000228 0.000572 0.433892 260.0 131.5 75.199734 2.0 66.75 131.5 196.25 261.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994644 0.040370 0.566108 0.999428 0.999772 1.000000 1.0 260.0 10079.592308 6176.270512 37.0 4862.75 9771.0 14234.00 24606.0 260.0 5251.976923 5641.712588 0.0 10.75 3841.0 8582.25 24606.0 260.0 0.499482 0.383979 0.0 0.001025 0.499978 0.999211 1.0 260.0 0.495389 0.381426 0.0 0.001024 0.498905 0.998409 1.0 260.0 1.023077 0.628697 0.003737 0.491273 0.986838 1.437940 2.498859 260.0 119.0 0.0 119.0 119.0 119.0 119.0 119.0 0.0 NaN NaN NaN NaN NaN NaN NaN
AVBlank2-Nov-10-15 238.0 0.192824 0.222908 -0.001252 0.000262 0.001632 0.462859 0.498760 260.0 8308.776923 5397.045860 6.0 3715.75 7950.5 11815.25 23139.0 260.0 3940.496154 4413.861907 0.0 17.75 2922.5 6140.25 23125.0 260.0 0.499097 0.383114 0.0 0.002444 0.491574 0.998383 1.0 260.0 0.497986 0.382710 0.0 0.002443 0.491275 0.997657 1.0 238.0 0.000391 0.000404 0.000181 0.000182 0.000187 0.000187 0.001475 260.0 0.187667 0.221018 0.0 0.000475 0.001950 0.457112 0.498947 260.0 0.186994 0.220307 0.0 0.000475 0.001950 0.454062 0.498919 260.0 38.907692 475.893753 0.0 0.0 2.0 4.00 7641.0 260.0 0.005349 0.042056 0.0 0.000000 0.000196 0.000535 0.458011 260.0 654.5 75.199734 525.0 589.75 654.5 719.25 784.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994651 0.042056 0.541989 0.999465 0.999804 1.000000 1.0 260.0 8269.869231 5374.484780 6.0 3715.50 7949.0 11787.25 23136.0 260.0 4329.373077 4793.582171 0.0 10.75 2945.5 6850.00 20876.0 260.0 0.500903 0.383114 0.0 0.001617 0.508426 0.997556 1.0 260.0 0.496665 0.380473 0.0 0.001616 0.507338 0.994973 1.0 260.0 1.023077 0.664549 0.000739 0.457528 0.978962 1.454836 2.849153 260.0 288.0 0.0 288.0 288.0 288.0 288.0 288.0 0.0 NaN NaN NaN NaN NaN NaN NaN
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Streck0011-Oct-27-15 246.0 0.210810 0.234076 -0.001696 -0.000188 0.000344 0.479881 0.499665 260.0 6483.957692 3140.232658 22.0 4020.25 6544.0 8838.50 13945.0 260.0 3278.588462 3088.744876 0.0 12.00 2924.5 4880.25 12944.0 260.0 0.508331 0.371546 0.0 0.001798 0.503622 0.999294 1.0 260.0 0.506058 0.371570 0.0 0.001798 0.500325 0.998624 1.0 246.0 0.000454 0.000534 0.000145 0.000166 0.000188 0.000286 0.001696 260.0 0.211262 0.233291 0.0 0.000000 0.000839 0.479747 0.499831 260.0 0.209352 0.231582 0.0 0.000000 0.000839 0.476564 0.499831 260.0 17.053846 144.523411 0.0 0.0 2.0 4.00 2211.0 260.0 0.004433 0.031904 0.0 0.000000 0.000237 0.000627 0.315542 260.0 2993.5 75.199734 2864.0 2928.75 2993.5 3058.25 3123.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.995567 0.031904 0.684458 0.999373 0.999763 1.000000 1.0 260.0 6466.903846 3145.216293 22.0 4017.00 6419.5 8837.25 13943.0 260.0 3188.315385 2976.567351 0.0 4.75 2995.5 5026.00 13112.0 260.0 0.491669 0.371546 0.0 0.000706 0.496378 0.998202 1.0 260.0 0.489509 0.371608 0.0 0.000706 0.493335 0.996280 1.0 260.0 1.023077 0.495484 0.003471 0.634339 1.032551 1.394590 2.200324 260.0 260.0 0.0 260.0 260.0 260.0 260.0 260.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0011-Oct-28-15 241.0 0.205441 0.231083 -0.001912 -0.000177 0.000380 0.473077 0.499131 260.0 4731.261538 2374.518234 16.0 2933.50 4960.5 6750.50 10319.0 260.0 2379.253846 2290.232986 0.0 6.50 2083.0 3686.50 9902.0 260.0 0.506169 0.372251 0.0 0.001674 0.503943 0.999173 1.0 260.0 0.504057 0.372228 0.0 0.001674 0.502276 0.998558 1.0 241.0 0.000481 0.000609 0.000154 0.000154 0.000177 0.000280 0.001926 260.0 0.208496 0.230882 0.0 0.000000 0.000995 0.473220 0.499308 260.0 0.206775 0.229371 0.0 0.000000 0.000995 0.470632 0.498619 260.0 12.011538 101.863277 0.0 0.0 1.0 3.00 1569.0 260.0 0.004171 0.029830 0.0 0.000000 0.000279 0.000591 0.299599 260.0 2996.5 75.199734 2867.0 2931.75 2996.5 3061.25 3126.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.995829 0.029830 0.700401 0.999409 0.999721 1.000000 1.0 260.0 4719.250000 2375.987969 16.0 2931.50 4903.5 6750.50 10317.0 260.0 2339.996154 2228.965512 0.0 4.00 2060.5 3663.00 9436.0 260.0 0.493831 0.372251 0.0 0.000827 0.496057 0.998326 1.0 260.0 0.491772 0.372212 0.0 0.000827 0.494751 0.988792 1.0 260.0 1.023077 0.513460 0.003460 0.634333 1.072647 1.459712 2.231356 260.0 265.0 0.0 265.0 265.0 265.0 265.0 265.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0011-Oct-29-15 246.0 0.207321 0.232747 -0.001432 0.000134 0.001278 0.477357 0.499840 261.0 8374.291188 4270.020517 2.0 4733.00 9106.0 11547.00 22901.0 261.0 4281.486590 4248.003807 0.0 19.00 3675.0 6253.00 22853.0 261.0 0.509541 0.371303 0.0 0.001992 0.503858 0.998339 1.0 261.0 0.508096 0.371110 0.0 0.001987 0.502701 0.997904 1.0 246.0 0.000437 0.000520 0.000154 0.000160 0.000175 0.000236 0.001657 261.0 0.210774 0.232345 0.0 0.000529 0.001795 0.477604 0.500000 261.0 0.209631 0.231176 0.0 0.000529 0.001794 0.476935 0.500000 261.0 16.881226 124.900134 0.0 0.0 2.0 6.00 1743.0 261.0 0.002821 0.018226 0.0 0.000000 0.000279 0.000663 0.223548 261.0 2735.0 75.488410 2605.0 2670.00 2735.0 2800.00 2865.0 261.0 7.626277e+07 6.038661e+07 299411.0 25194665.0 56423074.0 1.241092e+08 247752019.0 261.0 564.858238 15.858964 522.0 555.0 566.0 576.0 597.0 261.0 0.997179 0.018226 0.776452 0.999337 0.999721 1.000000 1.0 261.0 8357.409962 4273.629581 2.0 4692.00 9092.0 11542.00 22897.0 261.0 4075.923372 3837.304234 0.0 14.00 3706.0 6400.00 15623.0 261.0 0.490459 0.371303 0.0 0.001661 0.496142 0.998008 1.0 261.0 0.489083 0.371121 0.0 0.001661 0.494287 0.993397 1.0 261.0 1.019157 0.519664 0.000243 0.576009 1.108207 1.405278 2.787068 261.0 267.0 0.0 267.0 267.0 267.0 267.0 267.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-22-15 237.0 0.215057 0.234426 -0.001675 -0.000086 0.001058 0.476527 0.499443 260.0 7568.742308 4287.704277 3.0 4317.25 7600.0 10807.75 16937.0 260.0 3635.623077 3817.826818 0.0 13.00 2718.0 6039.50 16764.0 260.0 0.470464 0.364405 0.0 0.001463 0.489246 0.596291 1.0 260.0 0.469474 0.364403 0.0 0.001462 0.488747 0.596252 1.0 237.0 0.000453 0.000512 0.000186 0.000186 0.000202 0.000202 0.001675 260.0 0.218880 0.233096 0.0 0.000282 0.002327 0.476908 0.499827 260.0 0.217978 0.232313 0.0 0.000282 0.002326 0.476458 0.499827 260.0 27.169231 298.253867 0.0 0.0 2.0 5.00 4729.0 260.0 0.005642 0.044344 0.0 0.000000 0.000270 0.000644 0.466555 260.0 3254.5 75.199734 3125.0 3189.75 3254.5 3319.25 3384.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994358 0.044344 0.533445 0.999356 0.999730 1.000000 1.0 260.0 7541.573077 4287.920914 3.0 4315.25 7507.5 10798.75 16935.0 260.0 3905.950000 3842.896820 0.0 81.75 3414.0 5959.00 16916.0 260.0 0.529536 0.364405 0.0 0.403709 0.510754 0.998537 1.0 260.0 0.524883 0.362020 0.0 0.399346 0.510057 0.997340 1.0 260.0 1.023077 0.579575 0.000406 0.583568 1.027302 1.460898 2.289397 260.0 248.0 0.0 248.0 248.0 248.0 248.0 248.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-23-15 239.0 0.214785 0.233485 -0.001568 -0.000185 0.000942 0.470841 0.499815 260.0 6026.711538 3388.226312 28.0 3433.75 6133.0 8565.75 19497.0 260.0 2877.592308 3003.444591 0.0 6.00 2201.5 4585.50 14301.0 260.0 0.474877 0.364635 0.0 0.000859 0.496608 0.602521 1.0 260.0 0.473871 0.364603 0.0 0.000858 0.494354 0.602432 1.0 239.0 0.000441 0.000475 0.000139 0.000185 0.000205 0.000321 0.001568 260.0 0.218515 0.232492 0.0 0.000175 0.003110 0.471153 0.500000 260.0 0.217596 0.231617 0.0 0.000171 0.003109 0.469237 0.499885 260.0 28.950000 372.856429 0.0 0.0 2.0 4.00 5986.0 260.0 0.005696 0.045678 0.0 0.000000 0.000219 0.000546 0.477657 260.0 3259.5 75.199734 3130.0 3194.75 3259.5 3324.25 3389.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994304 0.045678 0.522343 0.999454 0.999781 1.000000 1.0 260.0 5997.761538 3364.930180 28.0 3433.25 6130.0 8513.75 19484.0 260.0 3120.169231 3088.224547 0.0 25.00 2734.5 4618.25 19476.0 260.0 0.525123 0.364635 0.0 0.397479 0.503392 0.999141 1.0 260.0 0.520433 0.362248 0.0 0.371679 0.501003 0.997299 1.0 260.0 1.023077 0.575175 0.004753 0.582903 1.041120 1.454097 3.309754 260.0 253.0 0.0 253.0 253.0 253.0 253.0 253.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-26-15 241.0 0.219943 0.235145 -0.001699 -0.000187 0.000715 0.480851 0.499104 260.0 7733.123077 3982.549530 34.0 4486.00 8223.0 10837.50 15561.0 260.0 3729.442308 3768.491695 0.0 6.75 3049.0 5915.25 15307.0 260.0 0.473738 0.364618 0.0 0.000990 0.498682 0.583708 1.0 260.0 0.472614 0.364536 0.0 0.000990 0.497397 0.583540 1.0 241.0 0.000437 0.000493 0.000149 0.000169 0.000187 0.000308 0.001699 260.0 0.219629 0.233938 0.0 0.000121 0.001359 0.480895 0.499304 260.0 0.218627 0.232985 0.0 0.000121 0.001359 0.479707 0.499074 260.0 34.250000 341.349450 0.0 0.0 2.0 4.00 5317.0 260.0 0.005763 0.044619 0.0 0.000000 0.000240 0.000606 0.473590 260.0 3253.5 75.199734 3124.0 3188.75 3253.5 3318.25 3383.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994237 0.044619 0.526410 0.999394 0.999760 1.000000 1.0 260.0 7698.873077 3986.466600 34.0 4485.50 8171.5 10774.50 15552.0 260.0 3969.430769 3710.619701 0.0 113.00 3699.5 5869.00 15546.0 260.0 0.526262 0.364618 0.0 0.416292 0.501318 0.999010 1.0 260.0 0.521622 0.362271 0.0 0.392319 0.501036 0.998176 1.0 260.0 1.023077 0.526883 0.004498 0.593489 1.087887 1.433780 2.058690 260.0 255.0 0.0 255.0 255.0 255.0 255.0 255.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-27-15 242.0 0.218861 0.235077 -0.001688 -0.000172 0.001470 0.477476 0.499664 260.0 7768.542308 3961.283814 20.0 4617.00 7949.5 10911.75 16308.0 260.0 3707.192308 3742.957932 0.0 12.00 3042.0 5927.75 15312.0 260.0 0.474361 0.364229 0.0 0.001341 0.498312 0.599059 1.0 260.0 0.473300 0.364139 0.0 0.001340 0.497446 0.599059 1.0 242.0 0.000438 0.000514 0.000140 0.000172 0.000175 0.000294 0.001688 260.0 0.220081 0.233807 0.0 0.000237 0.003483 0.477632 0.499837 260.0 0.219167 0.232965 0.0 0.000237 0.003482 0.476872 0.499673 260.0 29.388462 328.421742 0.0 0.0 2.0 4.00 5210.0 260.0 0.005660 0.044915 0.0 0.000000 0.000216 0.000539 0.474759 260.0 3253.5 75.199734 3124.0 3188.75 3253.5 3318.25 3383.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994340 0.044915 0.525241 0.999461 0.999784 1.000000 1.0 260.0 7739.153846 3961.869974 20.0 4612.00 7921.0 10885.75 16308.0 260.0 4031.961538 3768.329331 0.0 126.75 3721.0 6123.75 16296.0 260.0 0.525639 0.364229 0.0 0.400941 0.501688 0.998659 1.0 260.0 0.521040 0.361902 0.0 0.366156 0.501370 0.997863 1.0 260.0 1.023077 0.521681 0.002634 0.608035 1.046908 1.437021 2.147679 260.0 260.0 0.0 260.0 260.0 260.0 260.0 260.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-28-15 239.0 0.215873 0.233196 -0.001549 0.000081 0.001763 0.474875 0.499392 260.0 6344.084615 3369.266671 50.0 3637.75 6672.5 9077.25 13568.0 260.0 3057.796154 3121.511850 0.0 10.00 2326.0 4862.50 12124.0 260.0 0.475575 0.364633 0.0 0.001879 0.499995 0.600981 1.0 260.0 0.474617 0.364566 0.0 0.001879 0.497584 0.600981 1.0 239.0 0.000447 0.000551 0.000157 0.000157 0.000160 0.000328 0.001777 260.0 0.218547 0.232454 0.0 0.000440 0.002610 0.474759 0.499562 260.0 0.217691 0.231625 0.0 0.000440 0.002607 0.473478 0.499180 260.0 23.730769 256.406178 0.0 0.0 2.0 4.00 4078.0 260.0 0.005390 0.041637 0.0 0.000000 0.000229 0.000758 0.459752 260.0 3256.5 75.199734 3127.0 3191.75 3256.5 3321.25 3386.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994610 0.041637 0.540248 0.999242 0.999771 1.000000 1.0 260.0 6320.353846 3368.952016 50.0 3636.25 6590.0 9075.00 13566.0 260.0 3262.557692 3138.956388 0.0 101.25 2923.0 4764.00 13037.0 260.0 0.524425 0.364633 0.0 0.399019 0.500005 0.998121 1.0 260.0 0.519993 0.362148 0.0 0.385640 0.498310 0.997341 1.0 260.0 1.023077 0.543344 0.008063 0.586641 1.076039 1.463840 2.188039 260.0 265.0 0.0 265.0 265.0 265.0 265.0 265.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0012-Oct-29-15 244.0 0.221209 0.235002 -0.001566 0.000082 0.001446 0.475121 0.499683 261.0 9244.386973 5059.270708 2.0 4927.00 9770.0 12946.00 23495.0 261.0 4490.218391 4613.210529 0.0 13.00 3545.0 7096.00 19206.0 261.0 0.476735 0.364193 0.0 0.001265 0.498585 0.604332 1.0 261.0 0.476112 0.364054 0.0 0.001265 0.497784 0.604223 1.0 244.0 0.000404 0.000480 0.000150 0.000150 0.000160 0.000285 0.001571 261.0 0.219562 0.232876 0.0 0.000407 0.003863 0.474375 0.499833 261.0 0.219059 0.232364 0.0 0.000393 0.003863 0.473442 0.499649 261.0 26.961686 265.746030 0.0 0.0 2.0 6.00 4157.0 261.0 0.003636 0.027961 0.0 0.000000 0.000260 0.000739 0.360757 261.0 2996.0 75.488410 2866.0 2931.00 2996.0 3061.00 3126.0 261.0 7.587459e+07 6.043962e+07 299411.0 25009441.0 56204945.0 1.241092e+08 247752019.0 261.0 564.789272 15.849461 522.0 555.0 566.0 576.0 597.0 261.0 0.996364 0.027961 0.639243 0.999261 0.999740 1.000000 1.0 261.0 9217.425287 5060.909195 2.0 4920.00 9725.0 12946.00 23495.0 261.0 4727.206897 4586.927781 0.0 84.00 4134.0 7166.00 23490.0 261.0 0.523265 0.364193 0.0 0.395668 0.501415 0.998735 1.0 261.0 0.520252 0.361970 0.0 0.395596 0.500739 0.997272 1.0 261.0 1.019157 0.557765 0.000220 0.543182 1.077104 1.427245 2.590231 261.0 267.0 0.0 267.0 267.0 267.0 267.0 267.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-22-15 242.0 0.217401 0.231080 -0.001122 0.000151 0.002514 0.476287 0.499733 260.0 8802.726923 4633.747196 18.0 4778.00 9084.5 12528.50 19488.0 260.0 3856.157692 3797.451880 0.0 14.50 3495.0 6331.25 17268.0 260.0 0.467039 0.357997 0.0 0.001649 0.494397 0.614982 1.0 260.0 0.463087 0.355592 0.0 0.001648 0.492800 0.607110 1.0 242.0 0.000412 0.000456 0.000145 0.000167 0.000172 0.000266 0.001479 260.0 0.224427 0.230258 0.0 0.000495 0.069709 0.476083 0.500000 260.0 0.223302 0.229371 0.0 0.000495 0.069691 0.475106 0.500000 260.0 45.426923 446.552092 0.0 0.0 2.0 4.00 6614.0 260.0 0.005328 0.042177 0.0 0.000000 0.000211 0.000511 0.532057 260.0 3514.5 75.199734 3385.0 3449.75 3514.5 3579.25 3644.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994672 0.042177 0.467943 0.999489 0.999789 1.000000 1.0 260.0 8757.300000 4636.130050 18.0 4776.50 9065.0 12517.25 19478.0 260.0 4901.142308 4581.513392 0.0 260.25 4644.0 6900.50 19474.0 260.0 0.532961 0.357997 0.0 0.385018 0.505603 0.998351 1.0 260.0 0.531586 0.358094 0.0 0.370460 0.505392 0.997427 1.0 260.0 1.023077 0.538547 0.002092 0.555312 1.055825 1.456096 2.264948 260.0 248.0 0.0 248.0 248.0 248.0 248.0 248.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-23-15 242.0 0.221691 0.234785 -0.001536 -0.000211 0.001730 0.483306 0.499004 260.0 6814.115385 3581.937380 56.0 3781.25 7020.0 9628.50 15715.0 260.0 3027.107692 3004.897786 0.0 5.00 2625.5 4818.00 15666.0 260.0 0.467112 0.357820 0.0 0.000776 0.497337 0.571327 1.0 260.0 0.463131 0.355524 0.0 0.000776 0.496026 0.560154 1.0 242.0 0.000439 0.000435 0.000144 0.000211 0.000213 0.000322 0.001536 260.0 0.228240 0.234482 0.0 0.000172 0.090417 0.482296 0.499216 260.0 0.227006 0.233517 0.0 0.000159 0.090386 0.481874 0.499216 260.0 40.553846 396.102772 0.0 0.0 1.5 4.00 5385.0 260.0 0.005417 0.043296 0.0 0.000000 0.000226 0.000568 0.536889 260.0 3519.5 75.199734 3390.0 3454.75 3519.5 3584.25 3649.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994583 0.043296 0.463111 0.999432 0.999774 1.000000 1.0 260.0 6773.561538 3571.592828 56.0 3781.25 6996.0 9578.25 15706.0 260.0 3746.453846 3469.021317 0.0 136.25 3491.0 5480.25 15704.0 260.0 0.532888 0.357820 0.0 0.428673 0.502663 0.999224 1.0 260.0 0.531452 0.358001 0.0 0.407427 0.501900 0.998369 1.0 260.0 1.023077 0.537795 0.008408 0.567720 1.053989 1.445631 2.359463 260.0 253.0 0.0 253.0 253.0 253.0 253.0 253.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-26-15 245.0 0.223030 0.233142 -0.001441 -0.000165 0.002624 0.475641 0.499793 260.0 7673.600000 3787.062666 54.0 4618.25 8110.5 10698.00 15418.0 260.0 3402.665385 3244.843578 0.0 6.50 3016.5 5552.00 13129.0 260.0 0.467412 0.357935 0.0 0.000786 0.494304 0.589824 1.0 260.0 0.463318 0.355478 0.0 0.000786 0.493411 0.584504 1.0 245.0 0.000401 0.000428 0.000137 0.000165 0.000191 0.000191 0.001441 260.0 0.226685 0.232797 0.0 0.000000 0.092697 0.478030 0.500000 260.0 0.225469 0.231772 0.0 0.000000 0.092623 0.476410 0.500000 260.0 43.853846 425.035872 0.0 0.0 2.0 5.00 6332.0 260.0 0.005529 0.042990 0.0 0.000000 0.000239 0.000584 0.542402 260.0 3513.5 75.199734 3384.0 3448.75 3513.5 3578.25 3643.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994471 0.042990 0.457598 0.999416 0.999761 1.000000 1.0 260.0 7629.746154 3786.979896 54.0 4617.75 8081.0 10686.00 15414.0 260.0 4227.080769 3857.133124 0.0 323.75 4053.0 5995.00 15414.0 260.0 0.532588 0.357935 0.0 0.410176 0.505696 0.999214 1.0 260.0 0.531153 0.358037 0.0 0.371865 0.505443 0.998223 1.0 260.0 1.023077 0.504907 0.007200 0.615725 1.081326 1.426303 2.055593 260.0 255.0 0.0 255.0 255.0 255.0 255.0 255.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-27-15 248.0 0.225760 0.234935 -0.001538 0.000003 0.007201 0.483067 0.499645 260.0 8681.807692 4188.946390 47.0 5549.75 8868.5 12156.75 18831.0 260.0 3900.107692 3743.884541 0.0 12.00 3429.0 6187.25 16631.0 260.0 0.466693 0.357561 0.0 0.001601 0.496488 0.572054 1.0 260.0 0.462942 0.355316 0.0 0.001600 0.494558 0.565465 1.0 248.0 0.000411 0.000451 0.000151 0.000170 0.000192 0.000192 0.001538 260.0 0.228436 0.234376 0.0 0.000328 0.088674 0.483509 0.499836 260.0 0.227189 0.233304 0.0 0.000328 0.088674 0.482284 0.499537 260.0 43.680769 424.507430 0.0 0.0 2.0 4.00 6234.0 260.0 0.005168 0.040761 0.0 0.000000 0.000206 0.000550 0.496852 260.0 3513.5 75.199734 3384.0 3448.75 3513.5 3578.25 3643.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994832 0.040761 0.503148 0.999450 0.999794 1.000000 1.0 260.0 8638.126923 4189.420084 47.0 5549.75 8719.5 12090.00 18821.0 260.0 4738.019231 4314.388374 0.0 488.25 4592.0 6881.00 18820.0 260.0 0.533307 0.357561 0.0 0.427946 0.503512 0.998399 1.0 260.0 0.531890 0.357708 0.0 0.408705 0.503229 0.997755 1.0 260.0 1.023077 0.493632 0.005539 0.653991 1.045077 1.432569 2.219073 260.0 260.0 0.0 260.0 260.0 260.0 260.0 260.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-28-15 247.0 0.223113 0.233539 -0.001614 -0.000011 0.011457 0.480310 0.499594 260.0 9447.523077 4772.085691 74.0 5581.75 10053.0 13339.25 19101.0 260.0 4160.834615 3996.474069 0.0 13.50 3626.0 6783.50 18124.0 260.0 0.467489 0.358053 0.0 0.000984 0.495878 0.603008 1.0 260.0 0.463593 0.355678 0.0 0.000984 0.491265 0.590640 1.0 247.0 0.000427 0.000498 0.000165 0.000165 0.000175 0.000268 0.001710 260.0 0.226289 0.232500 0.0 0.000305 0.076512 0.480045 0.499818 260.0 0.225129 0.231530 0.0 0.000305 0.076477 0.478735 0.499772 260.0 51.903846 503.952542 0.0 0.0 2.0 5.00 7527.0 260.0 0.005257 0.041076 0.0 0.000000 0.000261 0.000606 0.525702 260.0 3516.5 75.199734 3387.0 3451.75 3516.5 3581.25 3646.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.994743 0.041076 0.474298 0.999394 0.999739 1.000000 1.0 260.0 9395.619231 4768.864901 74.0 5580.25 9727.0 13308.00 19089.0 260.0 5234.784615 4839.802235 0.0 457.50 4913.0 7419.50 19088.0 260.0 0.532511 0.358053 0.0 0.396992 0.504122 0.999016 1.0 260.0 0.531150 0.358158 0.0 0.370318 0.502778 0.997599 1.0 260.0 1.023077 0.516772 0.008013 0.604450 1.088644 1.444514 2.068457 260.0 265.0 0.0 265.0 265.0 265.0 265.0 265.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0013-Oct-29-15 246.0 0.223152 0.233638 -0.001500 0.000103 0.003080 0.476985 0.499783 261.0 11558.210728 5722.716570 2.0 7108.00 12134.0 16096.00 24366.0 261.0 5186.390805 4949.260674 0.0 15.00 4250.0 8207.00 20869.0 261.0 0.465309 0.357859 0.0 0.001165 0.495810 0.571809 1.0 261.0 0.461836 0.355473 0.0 0.001164 0.494768 0.571570 1.0 246.0 0.000392 0.000447 0.000157 0.000157 0.000162 0.000191 0.001500 261.0 0.226647 0.232942 0.0 0.000405 0.101663 0.477162 0.499970 261.0 0.225804 0.232185 0.0 0.000405 0.101618 0.477067 0.499819 261.0 58.429119 591.586348 0.0 1.0 2.0 7.00 9089.0 261.0 0.004615 0.036929 0.0 0.000053 0.000231 0.000595 0.516743 261.0 3257.0 75.488410 3127.0 3192.00 3257.0 3322.00 3387.0 261.0 7.587459e+07 6.043962e+07 299411.0 25009441.0 56204945.0 1.241092e+08 247752019.0 261.0 564.789272 15.849461 522.0 555.0 566.0 576.0 597.0 261.0 0.995385 0.036929 0.483257 0.999405 0.999769 0.999947 1.0 261.0 11499.781609 5717.533850 2.0 7090.00 12101.0 16087.00 24350.0 261.0 6313.390805 5762.349721 0.0 385.00 6024.0 9128.00 24264.0 261.0 0.534691 0.357859 0.0 0.428191 0.504190 0.998835 1.0 261.0 0.533548 0.357728 0.0 0.407256 0.503555 0.997044 1.0 261.0 1.019157 0.504606 0.000176 0.626755 1.069928 1.419281 2.148497 261.0 267.0 0.0 267.0 267.0 267.0 267.0 267.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-22-15 239.0 0.227204 0.229920 -0.001167 0.000104 0.114332 0.470799 0.499666 260.0 9828.019231 5830.332077 6.0 5221.00 9533.5 14292.75 23879.0 260.0 4710.196154 4837.296008 0.0 21.50 3922.0 7736.00 22082.0 260.0 0.476303 0.354604 0.0 0.003438 0.494934 0.591369 1.0 260.0 0.474697 0.354653 0.0 0.003438 0.493428 0.591167 1.0 239.0 0.000384 0.000368 0.000160 0.000190 0.000197 0.000197 0.001231 260.0 0.228891 0.229181 0.0 0.000356 0.118772 0.469595 0.499862 260.0 0.227457 0.228063 0.0 0.000356 0.118767 0.469022 0.499807 260.0 15.650000 113.184531 0.0 0.0 1.0 4.00 1616.0 260.0 0.003439 0.027695 0.0 0.000000 0.000131 0.000395 0.312663 260.0 3774.5 75.199734 3645.0 3709.75 3774.5 3839.25 3904.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996561 0.027695 0.687337 0.999605 0.999869 1.000000 1.0 260.0 9812.369231 5834.547236 6.0 5221.00 9402.5 14289.50 23864.0 260.0 5102.173077 4972.398643 0.0 256.75 4538.0 7501.75 23829.0 260.0 0.523697 0.354604 0.0 0.408631 0.505066 0.996562 1.0 260.0 0.521864 0.354608 0.0 0.387712 0.503566 0.992553 1.0 260.0 1.023077 0.606926 0.000625 0.543496 0.992418 1.487846 2.485756 260.0 248.0 0.0 248.0 248.0 248.0 248.0 248.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-23-15 226.0 0.226968 0.233301 -0.001366 -0.000098 0.039798 0.472917 0.499486 260.0 4561.296154 3058.058995 5.0 2098.25 4643.0 6770.25 17401.0 260.0 2196.392308 2309.036286 0.0 8.00 1668.5 3725.00 11167.0 260.0 0.473017 0.352174 0.0 0.003112 0.496633 0.586217 1.0 260.0 0.471479 0.352246 0.0 0.003112 0.495106 0.585666 1.0 226.0 0.000405 0.000396 0.000121 0.000186 0.000213 0.000213 0.001366 260.0 0.233527 0.231247 0.0 0.000273 0.211111 0.473123 0.500000 260.0 0.232232 0.230455 0.0 0.000273 0.211111 0.471850 0.500000 260.0 4.926923 33.478606 0.0 0.0 0.0 2.00 497.0 260.0 0.003401 0.028225 0.0 0.000000 0.000000 0.000544 0.335616 260.0 3779.5 75.199734 3650.0 3714.75 3779.5 3844.25 3909.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996599 0.028225 0.664384 0.999456 1.000000 1.000000 1.0 260.0 4556.369231 3057.727204 5.0 2097.50 4631.5 6769.50 17390.0 260.0 2359.976923 2562.451945 0.0 51.00 1933.0 3574.25 17386.0 260.0 0.526983 0.352174 0.0 0.413783 0.503367 0.996888 1.0 260.0 0.525120 0.352113 0.0 0.408348 0.502998 0.991933 1.0 260.0 1.023077 0.685908 0.001121 0.470627 1.041403 1.518535 3.902961 260.0 253.0 0.0 253.0 253.0 253.0 253.0 253.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-26-15 238.0 0.229139 0.231344 -0.001245 -0.000038 0.142869 0.470766 0.498664 260.0 7337.569231 4183.333353 4.0 4164.75 7251.5 10872.50 16850.0 260.0 3545.403846 3582.644085 0.0 16.50 2957.5 5841.00 15100.0 260.0 0.471615 0.353254 0.0 0.001593 0.496961 0.574632 1.0 260.0 0.470011 0.353254 0.0 0.001593 0.493252 0.574525 1.0 238.0 0.000377 0.000383 0.000142 0.000168 0.000184 0.000184 0.001245 260.0 0.231968 0.231254 0.0 0.000196 0.158352 0.473542 0.499909 260.0 0.230481 0.229951 0.0 0.000196 0.158266 0.471198 0.499909 260.0 12.865385 97.645492 0.0 0.0 1.0 3.00 1333.0 260.0 0.003381 0.026931 0.0 0.000000 0.000151 0.000426 0.296074 260.0 3773.5 75.199734 3644.0 3708.75 3773.5 3838.25 3903.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996619 0.026931 0.703926 0.999574 0.999849 1.000000 1.0 260.0 7324.703846 4188.512567 4.0 4164.75 7117.5 10871.00 16849.0 260.0 3779.300000 3596.166118 0.0 300.00 3450.5 5590.50 15329.0 260.0 0.528385 0.353254 0.0 0.425368 0.503039 0.998407 1.0 260.0 0.526608 0.353278 0.0 0.411476 0.502817 0.996488 1.0 260.0 1.023077 0.583282 0.000558 0.580691 1.011076 1.515952 2.349395 260.0 255.0 0.0 255.0 255.0 255.0 255.0 255.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-27-15 244.0 0.233592 0.233656 -0.000997 -0.000004 0.145515 0.474716 0.498764 260.0 9370.976923 4779.072755 26.0 5966.00 9455.5 12846.25 21096.0 260.0 4458.534615 4274.383251 0.0 16.00 3968.0 6836.25 19528.0 260.0 0.474527 0.351285 0.0 0.002259 0.499090 0.582285 1.0 260.0 0.472894 0.351313 0.0 0.002258 0.496317 0.582140 1.0 244.0 0.000388 0.000383 0.000140 0.000180 0.000198 0.000198 0.001231 260.0 0.236123 0.232707 0.0 0.000254 0.246076 0.474509 0.500000 260.0 0.234634 0.231519 0.0 0.000254 0.246044 0.472537 0.500000 260.0 14.965385 109.212709 0.0 0.0 2.0 4.00 1573.0 260.0 0.003538 0.027789 0.0 0.000000 0.000219 0.000510 0.308715 260.0 3773.5 75.199734 3644.0 3708.75 3773.5 3838.25 3903.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996462 0.027789 0.691285 0.999490 0.999781 1.000000 1.0 260.0 9356.011538 4784.412857 26.0 5965.75 9356.0 12845.75 21088.0 260.0 4897.476923 4474.983317 0.0 565.25 4566.0 7154.50 21087.0 260.0 0.525473 0.351285 0.0 0.417715 0.500910 0.997741 1.0 260.0 0.523568 0.351209 0.0 0.403961 0.500080 0.993405 1.0 260.0 1.023077 0.521756 0.002839 0.651338 1.032305 1.402490 2.303157 260.0 260.0 0.0 260.0 260.0 260.0 260.0 260.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-28-15 237.0 0.232754 0.232157 -0.001231 0.000214 0.113329 0.472461 0.498843 260.0 6318.196154 3577.331667 36.0 3264.25 6476.5 9315.50 13763.0 260.0 3039.273077 3096.707502 0.0 12.75 2333.0 4819.75 13747.0 260.0 0.475614 0.351871 0.0 0.002271 0.497522 0.593193 1.0 260.0 0.473964 0.351744 0.0 0.002271 0.494777 0.592761 1.0 237.0 0.000392 0.000420 0.000171 0.000171 0.000178 0.000178 0.001340 260.0 0.234052 0.231103 0.0 0.000466 0.248684 0.472296 0.499014 260.0 0.232662 0.229982 0.0 0.000466 0.248671 0.471034 0.499014 260.0 8.776923 55.829133 0.0 0.0 1.0 4.00 849.0 260.0 0.003397 0.026214 0.0 0.000000 0.000226 0.000588 0.293388 260.0 3776.5 75.199734 3647.0 3711.75 3776.5 3841.25 3906.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996603 0.026214 0.706612 0.999412 0.999774 1.000000 1.0 260.0 6309.419231 3577.164871 36.0 3264.00 6474.0 9313.25 13753.0 260.0 3270.146154 3122.292767 0.0 204.25 2856.5 4984.50 13025.0 260.0 0.524386 0.351871 0.0 0.406807 0.502478 0.997729 1.0 260.0 0.522640 0.351821 0.0 0.400826 0.502011 0.990092 1.0 260.0 1.023077 0.579261 0.005829 0.528565 1.048710 1.508417 2.228580 260.0 265.0 0.0 265.0 265.0 265.0 265.0 265.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0014-Oct-29-15 240.0 0.233388 0.233694 -0.001226 0.000286 0.134165 0.475001 0.499741 260.0 10789.788462 6093.316574 10.0 5747.00 10818.5 15364.25 24257.0 260.0 5133.680769 5174.044369 0.0 21.75 4612.5 7866.25 23708.0 260.0 0.474497 0.351856 0.0 0.002195 0.499482 0.576576 1.0 260.0 0.473633 0.351744 0.0 0.002195 0.493796 0.576538 1.0 240.0 0.000375 0.000425 0.000152 0.000152 0.000155 0.000181 0.001370 260.0 0.235183 0.232501 0.0 0.000598 0.196811 0.475232 0.499895 260.0 0.234430 0.231792 0.0 0.000598 0.196811 0.473217 0.499817 260.0 15.023077 114.462954 0.0 0.0 2.0 6.00 1783.0 260.0 0.002075 0.013721 0.0 0.000000 0.000205 0.000592 0.152198 260.0 3517.5 75.199734 3388.0 3452.75 3517.5 3582.25 3647.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.997925 0.013721 0.847802 0.999408 0.999795 1.000000 1.0 260.0 10774.765385 6093.257805 10.0 5725.50 10728.5 15362.00 24244.0 260.0 5641.084615 5482.863484 0.0 347.25 5203.5 8071.75 24238.0 260.0 0.525503 0.351856 0.0 0.423424 0.500518 0.997805 1.0 260.0 0.524291 0.351415 0.0 0.414763 0.500279 0.993316 1.0 260.0 1.023077 0.577762 0.000948 0.544925 1.025799 1.456823 2.300024 260.0 267.0 0.0 267.0 267.0 267.0 267.0 267.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0015-Oct-22-15 243.0 0.207353 0.232467 -0.001650 -0.000177 0.000742 0.479736 0.499426 262.0 6524.183206 4203.215949 1.0 3435.25 5417.0 9748.75 17967.0 262.0 3243.427481 3597.498522 0.0 4.00 2222.5 5309.00 16015.0 262.0 0.498211 0.379455 0.0 0.000824 0.502497 0.998787 1.0 262.0 0.497258 0.379124 0.0 0.000824 0.501938 0.997997 1.0 243.0 0.000427 0.000472 0.000160 0.000177 0.000192 0.000246 0.001650 262.0 0.199792 0.231342 0.0 0.000150 0.000921 0.478134 0.499603 262.0 0.199195 0.230752 0.0 0.000150 0.000921 0.476951 0.499132 262.0 8.595420 51.760764 0.0 0.0 1.0 4.00 563.0 262.0 0.003635 0.032174 0.0 0.000000 0.000163 0.000551 0.435855 262.0 4035.5 75.777085 3905.0 3970.25 4035.5 4100.75 4166.0 262.0 7.591765e+07 6.039550e+07 299411.0 25055747.0 56314009.5 1.240734e+08 247752019.0 262.0 564.973282 15.947809 522.0 555.0 566.5 576.0 597.0 262.0 0.996365 0.032174 0.564145 0.999449 0.999837 1.000000 1.0 262.0 6515.587786 4205.875153 1.0 3433.25 5417.0 9748.25 17964.0 262.0 3272.160305 3617.907145 0.0 5.25 2324.0 5125.50 16564.0 262.0 0.501789 0.379455 0.0 0.001213 0.497503 0.999176 1.0 262.0 0.499108 0.377789 0.0 0.001213 0.497466 0.998410 1.0 262.0 1.015267 0.654088 0.000156 0.534580 0.842972 1.517061 2.795952 262.0 248.0 0.0 248.0 248.0 248.0 248.0 248.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0015-Oct-23-15 242.0 0.206768 0.233016 -0.001741 -0.000203 0.000639 0.478899 0.499184 260.0 6614.892308 3828.746029 54.0 3769.75 6548.5 9441.75 21800.0 260.0 3393.746154 3663.316891 0.0 4.75 2618.0 4967.50 21794.0 260.0 0.496907 0.378115 0.0 0.000861 0.500009 0.998515 1.0 260.0 0.495766 0.377613 0.0 0.000860 0.498411 0.997493 1.0 242.0 0.000468 0.000514 0.000149 0.000203 0.000205 0.000319 0.001758 260.0 0.202086 0.232133 0.0 0.000000 0.000982 0.479126 0.499387 260.0 0.201473 0.231571 0.0 0.000000 0.000981 0.478483 0.499264 260.0 6.146154 36.200986 0.0 0.0 2.0 4.00 518.0 260.0 0.003744 0.033794 0.0 0.000000 0.000221 0.000524 0.457143 260.0 4039.5 75.199734 3910.0 3974.75 4039.5 4104.25 4169.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996256 0.033794 0.542857 0.999476 0.999779 1.000000 1.0 260.0 6608.746154 3829.943249 54.0 3767.00 6547.5 9427.25 21794.0 260.0 3215.000000 3258.856803 0.0 8.75 2483.5 4957.50 12847.0 260.0 0.503093 0.378115 0.0 0.001485 0.499991 0.999139 1.0 260.0 0.500490 0.376686 0.0 0.001484 0.499857 0.997820 1.0 260.0 1.023077 0.592164 0.008352 0.583040 1.012809 1.460286 3.371646 260.0 253.0 0.0 253.0 253.0 253.0 253.0 253.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0015-Oct-26-15 245.0 0.206802 0.232974 -0.001687 -0.000165 0.000380 0.476531 0.499820 261.0 6823.068966 3538.737494 2.0 4095.00 6877.0 9642.00 13702.0 261.0 3401.482759 3320.064937 0.0 4.00 2818.0 5536.00 13130.0 261.0 0.498825 0.378312 0.0 0.000727 0.500183 0.999354 1.0 261.0 0.497680 0.377805 0.0 0.000726 0.499195 0.998743 1.0 245.0 0.000423 0.000485 0.000162 0.000165 0.000180 0.000180 0.001687 261.0 0.201773 0.232034 0.0 0.000000 0.000722 0.476047 0.500000 261.0 0.201161 0.231463 0.0 0.000000 0.000721 0.475549 0.499259 261.0 11.183908 72.150302 0.0 0.0 2.0 4.00 817.0 261.0 0.003910 0.033970 0.0 0.000000 0.000216 0.000632 0.454900 261.0 4034.0 75.488410 3904.0 3969.00 4034.0 4099.00 4164.0 261.0 7.633374e+07 6.044730e+07 299411.0 25194665.0 56423074.0 1.253158e+08 247752019.0 261.0 564.816092 15.843850 522.0 555.0 566.0 576.0 597.0 261.0 0.996090 0.033970 0.545100 0.999368 0.999784 1.000000 1.0 261.0 6811.885057 3546.595449 2.0 4003.00 6872.0 9641.00 13697.0 261.0 3410.402299 3388.458572 0.0 4.00 2944.0 5378.00 13695.0 261.0 0.501175 0.378312 0.0 0.000646 0.499817 0.999273 1.0 261.0 0.498410 0.376649 0.0 0.000645 0.498719 0.997876 1.0 261.0 1.019157 0.528579 0.000299 0.611667 1.027213 1.440219 2.046658 261.0 255.0 0.0 255.0 255.0 255.0 255.0 255.0 0.0 NaN NaN NaN NaN NaN NaN NaN
Streck0015-Oct-28-15 237.0 0.202724 0.231789 -0.001922 -0.000151 0.000700 0.472345 0.499635 260.0 4851.376923 2688.983278 10.0 2830.00 4985.0 6925.50 11169.0 260.0 2446.134615 2487.132279 0.0 6.00 1868.0 3964.00 9716.0 260.0 0.497463 0.378350 0.0 0.001019 0.502164 0.998398 1.0 260.0 0.496463 0.377979 0.0 0.001018 0.502096 0.997868 1.0 237.0 0.000460 0.000571 0.000151 0.000151 0.000192 0.000265 0.001946 260.0 0.200977 0.231074 0.0 0.000114 0.001140 0.473096 0.499786 260.0 0.200373 0.230507 0.0 0.000114 0.001140 0.472613 0.499643 260.0 5.411538 28.550231 0.0 0.0 1.0 2.25 366.0 260.0 0.003599 0.032220 0.0 0.000000 0.000137 0.000620 0.428291 260.0 4036.5 75.199734 3907.0 3971.75 4036.5 4101.25 4166.0 260.0 7.610029e+07 6.044589e+07 299411.0 25148359.0 56314009.5 1.244109e+08 247752019.0 260.0 564.815385 15.874403 522.0 555.0 566.0 576.0 597.0 260.0 0.996401 0.032220 0.571709 0.999380 0.999863 1.000000 1.0 260.0 4845.965385 2690.670081 10.0 2828.75 4984.5 6923.50 11165.0 260.0 2399.830769 2488.791459 0.0 5.75 1884.5 3531.25 11158.0 260.0 0.502537 0.378350 0.0 0.001602 0.497836 0.998981 1.0 260.0 0.499938 0.376801 0.0 0.001600 0.497312 0.997976 1.0 260.0 1.023077 0.567063 0.002109 0.596801 1.051256 1.460476 2.355361 260.0 265.0 0.0 265.0 265.0 265.0 265.0 265.0 0.0 NaN NaN NaN NaN NaN NaN NaN

180 rows × 168 columns

In [15]:
df_bySNP.groupby('UNIQUEID').describe().unstack().to_csv('AV_blanks_SNP_stats_bySample.csv')
In [ ]:
In [17]:
return_numeric(df_all).hist(fc='k', ec='r', lw=1.5, bins=20, alpha=0.5, figsize=(38,4), layout=(1,6), sharey=True, )
sns.despine(offset=10)
sns.set_style('ticks')
In [116]:
return_numeric(df_all).corr()
Out[116]:
CLUSTER_DENSITY ID PCT_DD_CFDNA READS_PASS_QC SNPS_PASS_QC TOTAL_READS
CLUSTER_DENSITY 1.000000 -0.438208 0.035895 0.111602 -0.018882 0.112193
ID -0.438208 1.000000 -0.169445 -0.052886 0.023769 -0.053741
PCT_DD_CFDNA 0.035895 -0.169445 1.000000 -0.059137 -0.448501 -0.058069
READS_PASS_QC 0.111602 -0.052886 -0.059137 1.000000 0.618406 0.999925
SNPS_PASS_QC -0.018882 0.023769 -0.448501 0.618406 1.000000 0.614255
TOTAL_READS 0.112193 -0.053741 -0.058069 0.999925 0.614255 1.000000
In [121]:
df_all.PCT_DD_CFDNA.clip_upper(0.01).mean()
Out[121]:
0.00020777777777777792
In [123]:
# Gather via input list DART_patient_IDs linked by unique Sample_Name 
# --> insert into existing df_all_DART to replace nan's in current PATIENT_ID col
# df_DART_PIDs = pd.read_csv(DART_lock2_PIDs)
# df_DART_PIDs

# ## DART STUDY
# DART_PIDs = {}
# DART_PID_to_EID = defaultdict(list)
# # for i,(eid,pid) in enumerate(zip(df_all_DART.index, df_all_DART.PATIENT_STUDY_ID)):
# for pid,eid in zip(df_DART_PIDs.SITE_SUBJECT_ID, df_DART_PIDs.SAMPLE_NAME):
#     DART_PIDs[eid] = pid
#     DART_PID_to_EID[pid].append(eid)
# # DART_PIDs.items()

# df_DART_bySNP.describe(include='all')
# df_QC_Eval_bySNP.describe(include='all')
# print(sorted(df_DART_bySNP.SNP_NAME.unique()))
# len(sorted(df_DART_bySNP.SNP_NAME.unique()))
In [65]:
# help(pd.DataFrame.set_index)
In [66]:
# help(pd.DataFrame.plot)
In [42]:
df_bySNP.loc[df_bySNP.SNP_NAME=='IISNP145',:]
Out[42]:
ID RUN_ID EXPERIMENT_NAME AMPLICON_NAME SNP_NAME CHROMOSOME POSITION REF ALT REF_COUNT ALT_COUNT REF_FREQ ALT_FREQ REF_ALT_READS ALL_READS ERR_COUNT ERR_FREQ_TOTAL CHROMOSOME_MOCK POSITION_MOCK DONORFREQUENCY ALT_FREQ_TOTAL REF_FREQ_TOTAL DONORFREQUENCYTOTAL RECIPIENTALLELE DONORALLELE SUBSTITUTION SNPDIRECTION SAMPLE_PROJECT UNIQUEID RELATIVE_COVERAGE REFALTFRACTION SNPPASSQC BACKGROUND ADJUSTEDFREQUENCY RECIPIENTGENOCALL ERR_FREQ_FIXED
SAMPLE_NAME
Streck0008-Oct-22-15 2141.0 248.0 PS20151022P1 aIISNP145 IISNP145 chr12 5021348.0 G C 3900.0 3833.0 0.504332 0.495668 7733.0 8128.0 395.0 0.048597 chr12_5020815_5021938 534.0 0.495668 0.47158 0.479823 0.47158 G C GC IISNP145 GC NaN Streck0008-Oct-22-15 1.550679 0.951403 True 0.000174 0.495494 Recipient Hetero 0.544091
In [20]:
# !pip install cufflinks
In [28]:
import plotly.plotly as py
import cufflinks as cf

cf.set_config_file(offline=True, world_readable=True, theme='ggplot')
In [111]:
df_bySNP.UNIQUEID.describe()
Out[111]:
count                    46847
unique                     180
top       HRZ-6-9-60-Oct-7-15 
freq                       262
Name: UNIQUEID, dtype: object
In [110]:
# ax = df_bySNP.ERR_FREQ_TOTAL.groupby(df_bySNP.SNP_NAME).mean().nlargest(20)#.plot('barh', figsize=(10,25), )#, grid=True, fc='w', alpha=0.75, ec='b', lw=5)
sns.set_style('ticks')
df_bySNP['ERR_FREQ_FIXED'] = df_bySNP['ERR_FREQ_TOTAL'] + df_bySNP['ADJUSTEDFREQUENCY']
df_bySNP.ERR_FREQ_FIXED.describe()

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/ipykernel_launcher.py:3: SettingWithCopyWarning:


A value is trying to be set on a copy of a slice from a DataFrame.
Try using .loc[row_indexer,col_indexer] = value instead

See the caveats in the documentation: http://pandas.pydata.org/pandas-docs/stable/indexing.html#indexing-view-versus-copy
Out[110]:
count    38067.000000
mean         0.209294
std          0.226733
min         -0.001966
25%          0.000354
50%          0.003181
75%          0.468567
max          0.544091
Name: ERR_FREQ_FIXED, dtype: float64

SNP error & background stats

In [44]:
high = df_bySNP.ERR_FREQ_FIXED.groupby(df_bySNP.SNP_NAME).mean().nlargest(50)#.plot('barh', figsize=(10,25), )
high_snps = df_bySNP[df_bySNP.SNP_NAME.isin(high.index)]
In [40]:
high_snps_stats = high_snps.ERR_FREQ_FIXED.groupby(high_snps.SNP_NAME).describe().unstack()#.plot('barh', figsize=(8,30))
# high_snps_stats.drop('count', axis=1).sort_values(by='mean').iplot(by='index', kind='bar', figsize=(25,10), grid=True, logy=True,)
high_snps_stats.loc[:,['max', 'min', 'mean', '25%', '50%', '75%', 'std']].sort_values(by='50%').iplot(
    kind='bar', title="AV Blanks - Error frequency stats", theme='ggplot', logy=False, orientation='horizontal', sortbars=True,
    )#, figsize=(25,10), grid=True, logy=True,)

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/cufflinks/plotlytools.py:123: FutureWarning:

sort is deprecated, use sort_values(inplace=True) for INPLACE sorting
In [68]:
# high_snps
In [18]:
df_bySNP_numeric = df_bySNP.select_dtypes(['float64'])#.columns
df_bySNP_numeric = df_bySNP_numeric.loc[:,['REF_COUNT', 'ALT_COUNT', 'REF_FREQ', 'ALT_FREQ', 'REF_ALT_READS', 'ALL_READS', 'ERR_COUNT', 'ERR_FREQ_TOTAL', 'DONORFREQUENCY', 'ALT_FREQ_TOTAL', 'REF_FREQ_TOTAL', 'DONORFREQUENCYTOTAL', 'RELATIVE_COVERAGE', 'REFALTFRACTION', 'BACKGROUND', 'ADJUSTEDFREQUENCY', 'ERR_FREQ_FIXED']]                                  
df_bySNP_numeric
Out[18]:
REF_COUNT ALT_COUNT REF_FREQ ALT_FREQ REF_ALT_READS ALL_READS ERR_COUNT ERR_FREQ_TOTAL DONORFREQUENCY ALT_FREQ_TOTAL REF_FREQ_TOTAL DONORFREQUENCYTOTAL RELATIVE_COVERAGE REFALTFRACTION BACKGROUND ADJUSTEDFREQUENCY ERR_FREQ_FIXED
SAMPLE_NAME
HRZ-8-1-60-Oct-1-15 4.0 12710.0 0.000315 0.999685 12714.0 12714.0 0.0 0.000000 0.000315 0.999685 0.000315 0.000315 1.505214 1.000000 0.000165 0.000150 NaN
HRZ-8-1-60-Oct-1-15 13694.0 2.0 0.999854 0.000146 13696.0 13697.0 1.0 0.000073 0.000146 0.000146 0.999781 0.000146 1.621592 0.999927 0.001835 -0.001689 NaN
HRZ-8-1-60-Oct-1-15 5545.0 5243.0 0.513997 0.486003 10788.0 10790.0 2.0 0.000185 0.486003 0.485913 0.513902 0.485913 1.277431 0.999815 0.000165 0.485838 NaN
HRZ-8-1-60-Oct-1-15 6129.0 5884.0 0.510197 0.489803 12013.0 12014.0 1.0 0.000083 0.489803 0.489762 0.510155 0.489762 1.422341 0.999917 0.000167 0.489636 NaN
HRZ-8-1-60-Oct-1-15 4941.0 5512.0 0.472687 0.527313 10453.0 10460.0 7.0 0.000669 0.472687 0.526960 0.472371 0.472371 1.238362 0.999331 0.000167 0.472521 NaN
HRZ-8-1-60-Oct-1-15 5220.0 5200.0 0.500960 0.499040 10420.0 10424.0 4.0 0.000384 0.499040 0.498849 0.500767 0.498849 1.234100 0.999616 0.000167 0.498874 NaN
HRZ-8-1-60-Oct-1-15 5311.0 3129.0 0.629265 0.370735 8440.0 8443.0 3.0 0.000355 0.370735 0.370603 0.629042 0.370603 0.999569 0.999645 0.001077 0.369658 NaN
HRZ-8-1-60-Oct-1-15 6089.0 6559.0 0.481420 0.518580 12648.0 12651.0 3.0 0.000237 0.481420 0.518457 0.481306 0.481306 1.497755 0.999763 0.000167 0.481253 NaN
HRZ-8-1-60-Oct-1-15 2500.0 2585.0 0.491642 0.508358 5085.0 5085.0 0.0 0.000000 0.491642 0.508358 0.491642 0.491642 0.602015 1.000000 0.000167 0.491475 NaN
HRZ-8-1-60-Oct-1-15 6552.0 6.0 0.999085 0.000915 6558.0 6561.0 3.0 0.000457 0.000915 0.000914 0.998628 0.000914 0.776759 0.999543 0.001835 -0.000920 NaN
HRZ-8-1-60-Oct-1-15 4770.0 1.0 0.999790 0.000210 4771.0 4772.0 1.0 0.000210 0.000210 0.000210 0.999581 0.000210 0.564958 0.999790 0.000165 0.000045 NaN
HRZ-8-1-60-Oct-1-15 6704.0 2.0 0.999702 0.000298 6706.0 6709.0 3.0 0.000447 0.000298 0.000298 0.999255 0.000298 0.794280 0.999553 0.000167 0.000132 NaN
HRZ-8-1-60-Oct-1-15 10468.0 0.0 1.000000 0.000000 10468.0 10468.0 0.0 0.000000 0.000000 0.000000 1.000000 0.000000 1.239309 1.000000 0.000167 -0.000167 NaN
HRZ-8-1-60-Oct-1-15 1881.0 1982.0 0.486927 0.513073 3863.0 3998.0 135.0 0.033767 0.486927 0.495748 0.470485 0.470485 0.473324 0.966233 0.000165 0.486763 NaN
HRZ-8-1-60-Oct-1-15 0.0 4584.0 0.000000 1.000000 4584.0 4586.0 2.0 0.000436 0.000000 0.999564 0.000000 0.000000 0.542938 0.999564 0.000165 -0.000165 NaN
HRZ-8-1-60-Oct-1-15 3414.0 3667.0 0.482135 0.517865 7081.0 7084.0 3.0 0.000423 0.482135 0.517645 0.481931 0.481931 0.838677 0.999577 0.000165 0.481971 NaN
HRZ-8-1-60-Oct-1-15 4665.0 1.0 0.999786 0.000214 4666.0 4670.0 4.0 0.000857 0.000214 0.000214 0.998929 0.000214 0.552883 0.999143 0.000167 0.000048 NaN
HRZ-8-1-60-Oct-1-15 10510.0 0.0 1.000000 0.000000 10510.0 10515.0 5.0 0.000476 0.000000 0.000000 0.999524 0.000000 1.244874 0.999524 0.000167 -0.000167 NaN
HRZ-8-1-60-Oct-1-15 11830.0 4.0 0.999662 0.000338 11834.0 11835.0 1.0 0.000084 0.000338 0.000338 0.999578 0.000338 1.401149 0.999916 0.001818 -0.001480 NaN
HRZ-8-1-60-Oct-1-15 13242.0 4.0 0.999698 0.000302 13246.0 13248.0 2.0 0.000151 0.000302 0.000302 0.999547 0.000302 1.568434 0.999849 0.000165 0.000137 NaN
HRZ-8-1-60-Oct-1-15 0.0 4743.0 0.000000 1.000000 4743.0 4743.0 0.0 0.000000 0.000000 1.000000 0.000000 0.000000 0.561525 1.000000 0.000165 -0.000165 NaN
HRZ-8-1-60-Oct-1-15 5653.0 5210.0 0.520390 0.479610 10863.0 10867.0 4.0 0.000368 0.479610 0.479433 0.520199 0.479433 1.286547 0.999632 0.000165 0.479445 NaN
HRZ-8-1-60-Oct-1-15 6.0 13964.0 0.000429 0.999571 13970.0 13972.0 2.0 0.000143 0.000429 0.999427 0.000429 0.000429 1.654149 0.999857 0.000165 0.000265 NaN
HRZ-8-1-8-Oct-1-15 13536.0 4.0 0.999705 0.000295 13540.0 13544.0 4.0 0.000295 0.000295 0.000295 0.999409 0.000295 1.910967 0.999705 0.000267 0.000029 NaN
HRZ-8-1-8-Oct-1-15 5390.0 5015.0 0.518020 0.481980 10405.0 10405.0 0.0 0.000000 0.481980 0.481980 0.518020 0.481980 1.468075 1.000000 0.001140 0.480840 NaN
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
AVBlank2-Nov-10-15 1225.0 863.0 0.586686 0.413314 2088.0 2088.0 0.0 0.000000 0.413314 0.413314 0.586686 0.413314 0.257100 1.000000 0.000187 0.413127 NaN
AVBlank2-Nov-10-15 8.0 8182.0 0.000977 0.999023 8190.0 8190.0 0.0 0.000000 0.000977 0.999023 0.000977 0.000977 1.008452 1.000000 0.000182 0.000795 NaN
AVBlank2-Nov-10-15 5092.0 10.0 0.998040 0.001960 5102.0 5103.0 1.0 0.000196 0.001960 0.001960 0.997844 0.001960 0.628343 0.999804 0.000984 0.000976 NaN
AVBlank2-Nov-10-15 17359.0 6.0 0.999654 0.000346 17365.0 17374.0 9.0 0.000518 0.000346 0.000345 0.999137 0.000345 2.139297 0.999482 0.000269 0.000077 NaN
AVBlank2-Nov-10-15 8611.0 7628.0 0.530267 0.469733 16239.0 16239.0 0.0 0.000000 0.469733 0.469733 0.530267 0.469733 1.999542 1.000000 0.000984 0.468749 NaN
AVBlank2-Nov-10-15 8.0 12119.0 0.000660 0.999340 12127.0 12127.0 0.0 0.000000 0.000660 0.999340 0.000660 0.000660 1.493223 1.000000 0.000187 0.000473 NaN
AVBlank2-Nov-10-15 11570.0 22.0 0.998102 0.001898 11592.0 11595.0 3.0 0.000259 0.001898 0.001897 0.997844 0.001897 1.427716 0.999741 0.000984 0.000914 NaN
AVBlank2-Nov-10-15 11586.0 0.0 1.000000 0.000000 11586.0 11589.0 3.0 0.000259 0.000000 0.000000 0.999741 0.000000 1.426978 0.999741 0.000182 -0.000182 NaN
AVBlank2-Nov-10-15 639.0 807.0 0.441909 0.558091 1446.0 1447.0 1.0 0.000691 0.441909 0.557706 0.441603 0.441603 0.178172 0.999309 0.000182 0.441727 NaN
AVBlank2-Nov-10-15 10219.0 18.0 0.998242 0.001758 10237.0 10237.0 0.0 0.000000 0.001758 0.001758 0.998242 0.001758 1.260503 1.000000 0.000187 0.001571 NaN
AVBlank2-Nov-10-15 17665.0 2.0 0.999887 0.000113 17667.0 17671.0 4.0 0.000226 0.000113 0.000113 0.999660 0.000113 2.175867 0.999774 0.000182 -0.000069 NaN
AVBlank2-Nov-10-15 4.0 3500.0 0.001142 0.998858 3504.0 3507.0 3.0 0.000855 0.001142 0.998004 0.001141 0.001141 0.431824 0.999145 0.000182 0.000960 NaN
AVBlank2-Nov-10-15 15633.0 34.0 0.997830 0.002170 15667.0 15674.0 7.0 0.000447 0.002170 0.002169 0.997384 0.002169 1.929972 0.999553 0.000182 0.001988 NaN
AVBlank2-Nov-10-15 7279.0 16.0 0.997807 0.002193 7295.0 7295.0 0.0 0.000000 0.002193 0.002193 0.997807 0.002193 0.898248 1.000000 0.000987 0.001206 NaN
AVBlank2-Nov-10-15 0.0 6956.0 0.000000 1.000000 6956.0 6958.0 2.0 0.000287 0.000000 0.999713 0.000000 0.000000 0.856753 0.999713 0.000187 -0.000187 NaN
AVBlank2-Nov-10-15 4.0 2.0 0.666667 0.333333 6.0 6.0 0.0 0.000000 0.333333 0.333333 0.666667 0.333333 0.000739 1.000000 NaN NaN NaN
AVBlank2-Nov-10-15 5263.0 4317.0 0.549374 0.450626 9580.0 9581.0 1.0 0.000104 0.450626 0.450579 0.549316 0.450579 1.179728 0.999896 0.000182 0.450444 NaN
AVBlank2-Nov-10-15 4538.0 4730.0 0.489642 0.510358 9268.0 9272.0 4.0 0.000431 0.489642 0.510138 0.489431 0.489431 1.141681 0.999569 0.000182 0.489460 NaN
AVBlank2-Nov-10-15 2227.0 4.0 0.998207 0.001793 2231.0 2231.0 0.0 0.000000 0.001793 0.001793 0.998207 0.001793 0.274708 1.000000 0.000187 0.001606 NaN
AVBlank2-Nov-10-15 9.0 10227.0 0.000879 0.999121 10236.0 10238.0 2.0 0.000195 0.000879 0.998926 0.000879 0.000879 1.260626 0.999805 0.000987 -0.000108 NaN
AVBlank2-Nov-10-15 2.0 13616.0 0.000147 0.999853 13618.0 13622.0 4.0 0.000294 0.000147 0.999560 0.000147 0.000147 1.677305 0.999706 0.000182 -0.000035 NaN
AVBlank2-Nov-10-15 7505.0 2.0 0.999734 0.000266 7507.0 7511.0 4.0 0.000533 0.000266 0.000266 0.999201 0.000266 0.924845 0.999467 0.000182 0.000084 NaN
AVBlank2-Nov-10-15 7889.0 0.0 1.000000 0.000000 7889.0 7912.0 23.0 0.002907 0.000000 0.000000 0.997093 0.000000 0.974221 0.997093 0.000187 -0.000187 NaN
AVBlank2-Nov-10-15 2952.0 3045.0 0.492246 0.507754 5997.0 6006.0 9.0 0.001499 0.492246 0.506993 0.491508 0.491508 0.739531 0.998501 0.000187 0.492059 NaN
AVBlank2-Nov-10-15 12231.0 15.0 0.998775 0.001225 12246.0 12246.0 0.0 0.000000 0.001225 0.001225 0.998775 0.001225 1.507875 1.000000 0.000182 0.001043 NaN

46847 rows × 17 columns

In [19]:
df_bySNP_numeric.sort_index(inplace=True, axis=1)
AV_SNP_stats = df_bySNP_numeric.groupby(df_bySNP['SNP_NAME']).describe().unstack()
In [20]:
AV_SNP_stats
Out[20]:
ADJUSTEDFREQUENCY ALL_READS ALT_COUNT ALT_FREQ ALT_FREQ_TOTAL BACKGROUND DONORFREQUENCY DONORFREQUENCYTOTAL ERR_COUNT ERR_FREQ_FIXED ERR_FREQ_TOTAL REFALTFRACTION REF_ALT_READS REF_COUNT REF_FREQ REF_FREQ_TOTAL RELATIVE_COVERAGE
count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max
SNP_NAME
IISNP1 160.0 0.131740 0.201029 -0.000228 -0.000155 0.000303 0.353112 0.499579 180.0 3595.772222 1375.354458 1136.0 2685.00 3553.5 4373.25 12089.0 180.0 2822.655556 1628.832122 0.0 1733.75 2556.5 3857.25 12052.0 180.0 0.792703 0.300662 0.000000 0.502526 0.999424 1.000000 1.000000 180.0 0.792463 0.300575 0.000000 0.502526 0.999158 0.999710 1.000000 160.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000194 0.000235 180.0 0.133104 0.202945 0.000000 0.000000 0.000466 0.361941 0.499751 180.0 0.133063 0.202885 0.000000 0.000000 0.000466 0.361793 0.499751 180.0 1.033333 1.931509 0.0 0.00 0.0 1.00 13.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000300 0.000625 0.000000 0.000000 0.000000 0.000383 0.005100 180.0 0.999700 0.000625 0.994900 0.999617 1.000000 1.000000 1.000000 180.0 3594.738889 1375.091129 1136.0 2685.00 3553.5 4372.00 12087.0 180.0 772.083333 1204.692134 0.0 0.00 2.0 1525.25 5147.0 180.0 0.207297 0.300662 0.000000 0.000000 0.000576 0.497474 1.000000 180.0 0.207237 0.300579 0.000000 0.000000 0.000576 0.497474 1.000000 180.0 0.488795 0.149135 0.201477 0.390143 0.482366 0.573925 1.375175
IISNP10 53.0 0.251690 0.240454 -0.000379 -0.000321 0.445130 0.480009 0.498052 180.0 1009.005556 759.032260 26.0 526.00 761.5 1233.25 4153.0 180.0 280.238889 398.630510 0.0 0.00 95.0 424.25 2203.0 180.0 0.284186 0.300977 0.000000 0.000000 0.359272 0.502253 1.000000 180.0 0.284094 0.300881 0.000000 0.000000 0.359272 0.502100 1.000000 53.0 0.000336 0.000036 0.000236 0.000317 0.000332 0.000349 0.000435 180.0 0.208757 0.228312 0.000000 0.000000 0.003038 0.466164 0.498994 180.0 0.208687 0.228231 0.000000 0.000000 0.003033 0.465101 0.498994 180.0 0.400000 1.054917 0.0 0.00 0.0 0.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000366 0.001044 0.000000 0.000000 0.000000 0.000000 0.008475 180.0 0.999634 0.001044 0.991525 1.000000 1.000000 1.000000 1.000000 180.0 1008.605556 758.735279 26.0 526.00 761.5 1233.00 4153.0 180.0 728.366667 638.123374 0.0 311.25 553.0 973.25 3734.0 180.0 0.715814 0.300977 0.000000 0.497747 0.640728 1.000000 1.000000 180.0 0.715540 0.300842 0.000000 0.497594 0.640728 0.999611 1.000000 180.0 0.137662 0.098490 0.005890 0.074357 0.103696 0.174699 0.534824
IISNP100 160.0 0.262789 0.241652 -0.000216 -0.000026 0.464466 0.486461 0.499607 180.0 5093.600000 1388.917876 1573.0 4141.25 4993.5 5709.50 9906.0 180.0 1738.822222 1530.142653 0.0 1.00 2049.0 2760.75 5467.0 180.0 0.349730 0.296289 0.000000 0.000193 0.488292 0.515357 1.000000 180.0 0.349629 0.296207 0.000000 0.000193 0.488292 0.515186 1.000000 160.0 0.000181 0.000018 0.000144 0.000166 0.000180 0.000193 0.000235 180.0 0.271129 0.240459 0.000000 0.000184 0.466634 0.486767 0.499807 180.0 0.271050 0.240389 0.000000 0.000184 0.466366 0.486628 0.499615 180.0 1.466667 1.779461 0.0 0.00 1.0 2.00 14.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000282 0.000325 0.000000 0.000000 0.000230 0.000412 0.002644 180.0 0.999718 0.000325 0.997356 0.999588 0.999770 1.000000 1.000000 180.0 5092.133333 1388.351216 1571.0 4139.50 4993.0 5706.75 9906.0 180.0 3353.311111 1778.830183 0.0 2144.00 2865.5 4712.75 8266.0 180.0 0.650270 0.296289 0.000000 0.484643 0.511708 0.999807 1.000000 180.0 0.650089 0.296214 0.000000 0.484533 0.511708 0.999560 1.000000 180.0 0.695763 0.115497 0.262213 0.626391 0.684805 0.770081 0.954757
IISNP101 159.0 0.223176 0.219114 -0.000207 -0.000039 0.301633 0.442615 0.499027 180.0 9205.144444 4186.200216 138.0 6350.75 8153.0 11545.50 22461.0 180.0 3854.461111 3866.347231 0.0 3.00 3704.5 5596.75 18944.0 180.0 0.409406 0.330555 0.000000 0.000341 0.519460 0.577214 1.000000 180.0 0.409234 0.330435 0.000000 0.000341 0.519179 0.577024 1.000000 159.0 0.000180 0.000018 0.000144 0.000165 0.000179 0.000193 0.000228 180.0 0.238929 0.221316 0.000000 0.000160 0.311601 0.453455 0.500000 180.0 0.238817 0.221210 0.000000 0.000160 0.311532 0.452763 0.499925 180.0 4.683333 4.771277 0.0 1.00 3.0 6.25 27.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000492 0.000418 0.000000 0.000182 0.000385 0.000712 0.002224 180.0 0.999508 0.000418 0.997776 0.999288 0.999615 0.999818 1.000000 180.0 9200.461111 4183.971408 138.0 6349.50 8150.5 11537.25 22460.0 180.0 5346.000000 3978.231859 0.0 2944.75 4464.5 6949.50 18602.0 180.0 0.590594 0.330555 0.000000 0.422786 0.480540 0.999659 1.000000 180.0 0.590274 0.330345 0.000000 0.422646 0.480291 0.998979 1.000000 180.0 1.230206 0.415430 0.020206 0.935237 1.184647 1.453349 2.800127
IISNP102 154.0 0.307819 0.233596 -0.000220 0.000208 0.476467 0.489669 0.499281 180.0 11814.683333 2747.959199 4770.0 9740.75 11796.0 13685.25 17589.0 180.0 7065.794444 3572.885030 1.0 5029.25 6327.5 8604.75 16611.0 180.0 0.619883 0.279085 0.000111 0.494869 0.514725 0.999421 1.000000 180.0 0.602202 0.271028 0.000111 0.491056 0.513230 0.998947 1.000000 154.0 0.000181 0.000019 0.000144 0.000167 0.000182 0.000192 0.000235 180.0 0.305934 0.233386 0.000000 0.000437 0.474149 0.487590 0.499425 180.0 0.305790 0.233307 0.000000 0.000408 0.473624 0.487493 0.499141 180.0 232.944444 1253.389642 0.0 1.00 3.0 6.00 9089.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.017853 0.094499 0.000000 0.000091 0.000260 0.000504 0.542402 180.0 0.982147 0.094499 0.457598 0.999496 0.999740 0.999909 1.000000 180.0 11581.738889 2887.734045 4645.0 9348.75 11617.0 13574.75 17571.0 180.0 4515.944444 3499.967433 0.0 7.00 5100.5 6694.50 14474.0 180.0 0.380117 0.279085 0.000000 0.000579 0.485275 0.505131 0.999889 180.0 0.379946 0.278998 0.000000 0.000549 0.484990 0.505064 0.999492 180.0 1.615908 0.202820 1.045401 1.489849 1.599965 1.735257 2.248545
IISNP103 160.0 0.233118 0.242007 -0.000200 0.000436 0.004063 0.488260 0.499552 180.0 8170.227778 2210.992971 2749.0 6592.50 8135.5 9521.25 15863.0 180.0 4465.600000 3230.227200 0.0 2408.50 4509.0 6561.75 12387.0 180.0 0.540417 0.357612 0.000000 0.462053 0.503474 0.996258 1.000000 180.0 0.540295 0.357534 0.000000 0.462011 0.503331 0.996188 1.000000 160.0 0.000180 0.000018 0.000143 0.000165 0.000181 0.000192 0.000235 180.0 0.233912 0.241518 0.000000 0.000612 0.004510 0.487815 0.499743 180.0 0.233858 0.241462 0.000000 0.000612 0.004508 0.487687 0.499743 180.0 1.755556 2.134113 0.0 0.00 1.0 2.00 17.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000214 0.000242 0.000000 0.000000 0.000139 0.000294 0.001553 180.0 0.999786 0.000242 0.998447 0.999706 0.999861 1.000000 1.000000 180.0 8168.472222 2210.405098 2749.0 6591.25 8135.0 9520.25 15860.0 180.0 3702.872222 3075.644855 0.0 31.75 3669.0 5470.25 11512.0 180.0 0.459583 0.357612 0.000000 0.003742 0.496526 0.537947 1.000000 180.0 0.459490 0.357551 0.000000 0.003742 0.496395 0.537899 1.000000 180.0 1.123931 0.240229 0.541998 0.966096 1.114628 1.288552 1.742996
IISNP104 160.0 0.215182 0.230983 -0.000216 -0.000034 0.001103 0.468360 0.499004 180.0 5412.938889 2462.062548 1124.0 3532.50 5224.5 7016.00 12103.0 180.0 2046.061111 2315.334828 0.0 2.00 1556.0 3311.50 10845.0 180.0 0.366227 0.348548 0.000000 0.000317 0.448536 0.514749 1.000000 180.0 0.366190 0.348512 0.000000 0.000317 0.448536 0.514749 1.000000 160.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000196 0.000235 180.0 0.206199 0.229520 0.000000 0.000000 0.001040 0.466219 0.499216 180.0 0.206179 0.229498 0.000000 0.000000 0.001040 0.466219 0.499216 180.0 0.777778 1.964932 0.0 0.00 0.0 1.00 20.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000149 0.000389 0.000000 0.000000 0.000000 0.000160 0.003561 180.0 0.999851 0.000389 0.996439 0.999840 1.000000 1.000000 1.000000 180.0 5412.161111 2461.813056 1124.0 3532.50 5224.5 7016.00 12103.0 180.0 3366.100000 2508.636457 0.0 1601.75 3071.0 4854.25 12097.0 180.0 0.633773 0.348548 0.000000 0.485251 0.551464 0.999683 1.000000 180.0 0.633662 0.348464 0.000000 0.485251 0.551464 0.999432 1.000000 180.0 0.747092 0.320297 0.204758 0.475692 0.715003 1.016219 1.587612
IISNP105 147.0 0.238100 0.228841 -0.000220 -0.000027 0.321422 0.476655 0.499426 180.0 5940.944444 3953.390391 295.0 2864.50 5066.5 8534.50 18517.0 180.0 2059.961111 2792.138674 0.0 0.00 811.0 3634.00 14868.0 180.0 0.327925 0.322795 0.000000 0.000000 0.494270 0.531233 1.000000 180.0 0.327816 0.322673 0.000000 0.000000 0.494174 0.531113 1.000000 147.0 0.000179 0.000018 0.000144 0.000165 0.000180 0.000191 0.000220 180.0 0.215107 0.228810 0.000000 0.000000 0.001651 0.472845 0.499603 180.0 0.215044 0.228746 0.000000 0.000000 0.001648 0.472809 0.499107 180.0 2.144444 3.112638 0.0 0.00 1.0 3.00 27.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000364 0.000541 0.000000 0.000000 0.000201 0.000520 0.003384 180.0 0.999636 0.000541 0.996616 0.999480 0.999799 1.000000 1.000000 180.0 5938.800000 3951.778520 295.0 2861.75 5066.5 8530.75 18507.0 180.0 3878.838889 3435.513672 0.0 1386.75 3002.0 5142.75 16645.0 180.0 0.672075 0.322795 0.000000 0.468767 0.505730 1.000000 1.000000 180.0 0.671820 0.322642 0.000000 0.468670 0.505632 0.999596 1.000000 180.0 0.769495 0.432168 0.061647 0.435917 0.735755 1.073280 1.828168
IISNP106 160.0 0.237125 0.223951 -0.000202 0.000294 0.317091 0.478227 0.498721 180.0 9447.544444 2762.565398 3461.0 7353.50 9366.0 11436.75 16873.0 180.0 6857.766667 3519.119595 0.0 4561.75 6229.0 9021.50 16835.0 180.0 0.720753 0.282089 0.000000 0.502819 0.674514 0.999590 1.000000 180.0 0.720216 0.281828 0.000000 0.502312 0.674322 0.998739 0.999860 160.0 0.000178 0.000017 0.000144 0.000164 0.000178 0.000190 0.000219 180.0 0.221369 0.224744 0.000000 0.000381 0.294231 0.476127 0.498938 180.0 0.221229 0.224599 0.000000 0.000380 0.294051 0.475870 0.498899 180.0 6.944444 6.122330 0.0 3.00 6.0 9.00 37.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000701 0.000519 0.000000 0.000329 0.000613 0.000884 0.002561 180.0 0.999299 0.000519 0.997439 0.999116 0.999387 0.999671 1.000000 180.0 9440.600000 2759.396745 3459.0 7351.50 9364.5 11430.75 16837.0 180.0 2582.833333 2793.560453 0.0 4.00 2452.0 4731.50 12946.0 180.0 0.279247 0.282089 0.000000 0.000410 0.325486 0.497181 1.000000 180.0 0.279083 0.281941 0.000000 0.000410 0.325394 0.496679 0.999614 180.0 1.275795 0.187309 0.567019 1.172218 1.276793 1.393841 1.742488
IISNP107 134.0 0.299548 0.224557 -0.000228 0.000010 0.453292 0.484855 0.499534 180.0 2311.683333 1236.585850 349.0 1310.50 2149.5 2955.25 5765.0 180.0 1511.266667 1131.660744 0.0 785.25 1243.5 1928.00 5443.0 180.0 0.641926 0.247946 0.000000 0.496870 0.530238 0.999081 1.000000 180.0 0.641568 0.247881 0.000000 0.496463 0.530092 0.997723 1.000000 134.0 0.000182 0.000019 0.000144 0.000167 0.000182 0.000197 0.000228 180.0 0.313749 0.216447 0.000000 0.000687 0.454880 0.484248 0.500000 180.0 0.313538 0.216295 0.000000 0.000687 0.454802 0.484248 0.500000 180.0 1.438889 1.756596 0.0 0.00 1.0 2.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000631 0.000802 0.000000 0.000000 0.000382 0.001042 0.004090 180.0 0.999369 0.000802 0.995910 0.998958 0.999618 1.000000 1.000000 180.0 2310.244444 1235.931931 349.0 1310.00 2148.0 2953.75 5759.0 180.0 798.977778 717.649460 0.0 2.00 777.5 1266.25 2966.0 180.0 0.358074 0.247946 0.000000 0.000919 0.469762 0.503130 1.000000 180.0 0.357802 0.247693 0.000000 0.000919 0.469606 0.502781 1.000000 180.0 0.306825 0.135149 0.072931 0.207270 0.291607 0.421432 0.642582
IISNP108 9.0 0.154831 0.232613 -0.000192 -0.000175 -0.000161 0.435719 0.485223 180.0 1327.172222 1346.892632 26.0 359.00 904.0 1800.00 7102.0 180.0 382.238889 538.664305 0.0 1.00 167.5 499.50 3067.0 180.0 0.398192 0.297156 0.000000 0.001389 0.487255 0.517125 1.000000 180.0 0.314189 0.276913 0.000000 0.000757 0.342457 0.374525 1.000000 9.0 0.000180 0.000019 0.000160 0.000162 0.000175 0.000192 0.000209 180.0 0.287773 0.231155 0.000000 0.000000 0.453526 0.483440 0.500000 180.0 0.207756 0.168809 0.000000 0.000000 0.315843 0.345648 0.484594 180.0 405.283333 510.829376 0.0 75.75 210.0 545.50 3350.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.291172 0.138506 0.000000 0.274415 0.300143 0.422748 0.485030 180.0 0.708828 0.138506 0.514970 0.577252 0.699857 0.725585 1.000000 180.0 921.888889 911.255251 23.0 263.75 589.5 1293.75 4190.0 180.0 539.650000 604.052455 0.0 109.75 326.0 806.75 3751.0 180.0 0.601808 0.297156 0.000000 0.482875 0.512745 0.998611 1.000000 180.0 0.394639 0.177056 0.000000 0.346384 0.363728 0.531840 0.971209 180.0 0.172999 0.164543 0.005460 0.051996 0.124346 0.233318 0.840808
IISNP109 160.0 0.154673 0.223555 -0.000228 -0.000014 0.000327 0.467209 0.499343 180.0 9437.022222 3189.843797 2908.0 7429.75 9140.0 11050.25 19909.0 180.0 2285.850000 3204.548490 0.0 2.00 4.5 4438.50 16248.0 180.0 0.246732 0.325469 0.000000 0.000173 0.000513 0.507491 1.000000 180.0 0.246660 0.325384 0.000000 0.000173 0.000512 0.507475 0.999902 160.0 0.000181 0.000019 0.000144 0.000166 0.000180 0.000195 0.000235 180.0 0.153593 0.223081 0.000000 0.000162 0.000453 0.467380 0.499541 180.0 0.153543 0.223008 0.000000 0.000162 0.000453 0.467305 0.499312 180.0 3.427778 5.145949 0.0 0.00 2.0 4.00 38.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000351 0.000477 0.000000 0.000000 0.000232 0.000514 0.003342 180.0 0.999649 0.000477 0.996658 0.999486 0.999768 1.000000 1.000000 180.0 9433.594444 3188.238987 2906.0 7428.00 9137.0 11047.25 19890.0 180.0 7147.744444 4107.915526 0.0 4499.50 6744.0 9800.75 19888.0 180.0 0.753268 0.325469 0.000000 0.492509 0.999487 0.999827 1.000000 180.0 0.752988 0.325337 0.000000 0.492493 0.998909 0.999569 1.000000 180.0 1.273580 0.272004 0.696537 1.125050 1.272578 1.412471 2.154478
IISNP11 160.0 0.353841 0.202656 -0.000288 0.366236 0.461146 0.482656 0.499608 180.0 9255.933333 3241.901390 2378.0 6706.75 9091.5 11623.50 21340.0 180.0 3975.122222 2559.271886 0.0 2446.25 4126.5 5703.25 13073.0 180.0 0.438361 0.227728 0.000000 0.469326 0.508612 0.537710 0.999584 180.0 0.438230 0.227680 0.000000 0.469088 0.508458 0.537675 0.999584 160.0 0.000333 0.000151 0.000132 0.000177 0.000384 0.000464 0.000634 180.0 0.366845 0.194554 0.000000 0.411407 0.463635 0.482935 0.499915 180.0 0.366726 0.194490 0.000000 0.411189 0.463530 0.482863 0.499746 180.0 3.383333 4.635634 0.0 0.00 2.0 4.00 29.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000360 0.000474 0.000000 0.000000 0.000219 0.000496 0.002338 180.0 0.999640 0.000474 0.997662 0.999504 0.999781 1.000000 1.000000 180.0 9252.550000 3240.552614 2378.0 6698.75 9090.0 11619.00 21337.0 180.0 5277.427778 3114.155545 3.0 3315.75 4718.0 6202.50 18030.0 180.0 0.561639 0.227728 0.000416 0.462290 0.491388 0.530674 1.000000 180.0 0.561411 0.227564 0.000416 0.462261 0.491157 0.530405 0.999914 180.0 1.247338 0.305772 0.608462 1.025405 1.274052 1.440906 2.427515
IISNP110 160.0 0.224297 0.142993 -0.000197 0.123057 0.180578 0.366186 0.468218 180.0 8333.394444 1816.263060 2651.0 7138.00 8543.5 9516.50 11862.0 180.0 3653.088889 2758.969952 496.0 1232.00 2428.5 5708.25 10926.0 180.0 0.437648 0.309234 0.087915 0.148591 0.286785 0.638655 1.000000 180.0 0.437558 0.309167 0.087884 0.148565 0.286691 0.638631 1.000000 160.0 0.000179 0.000018 0.000145 0.000165 0.000178 0.000191 0.000235 180.0 0.216521 0.136843 0.000000 0.129422 0.172281 0.359865 0.468404 180.0 0.216477 0.136812 0.000000 0.129419 0.172251 0.359823 0.468360 180.0 1.650000 1.832283 0.0 0.00 1.0 2.00 12.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000198 0.000214 0.000000 0.000000 0.000137 0.000281 0.001264 180.0 0.999802 0.000214 0.998736 0.999719 0.999863 1.000000 1.000000 180.0 8331.744444 1815.946749 2651.0 7137.75 8540.5 9516.25 11860.0 180.0 4678.655556 2795.183702 0.0 2825.00 4373.5 7034.75 10114.0 180.0 0.562352 0.309234 0.000000 0.361345 0.713215 0.851409 0.912085 180.0 0.562244 0.309180 0.000000 0.361332 0.712981 0.851170 0.911771 180.0 1.148689 0.194060 0.522676 1.020648 1.117630 1.281325 1.672398
IISNP111 160.0 0.126563 0.211624 -0.000202 0.000414 0.000995 0.439632 0.499187 180.0 9532.277778 2525.282163 3373.0 7866.75 9702.5 11076.75 16299.0 180.0 3936.405556 4088.812721 1.0 9.00 3666.0 6897.25 13976.0 180.0 0.418369 0.414248 0.000127 0.001062 0.494139 0.997692 1.000000 180.0 0.418092 0.414030 0.000127 0.001061 0.493804 0.997146 0.999806 160.0 0.000180 0.000018 0.000143 0.000166 0.000180 0.000192 0.000228 180.0 0.139084 0.217517 0.000000 0.000619 0.001224 0.451048 0.499359 180.0 0.138948 0.217306 0.000000 0.000619 0.001223 0.450920 0.499040 180.0 10.950000 11.078831 0.0 4.00 9.0 13.00 89.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001141 0.001091 0.000000 0.000457 0.000987 0.001429 0.006441 180.0 0.998859 0.001091 0.993559 0.998571 0.999013 0.999543 1.000000 180.0 9521.327778 2522.402235 3371.0 7852.25 9693.5 11061.25 16288.0 180.0 5584.922222 4260.466849 0.0 21.00 5723.5 9074.50 15745.0 180.0 0.581631 0.414248 0.000000 0.002308 0.505861 0.998938 0.999873 180.0 0.580767 0.413545 0.000000 0.002301 0.505519 0.997718 0.999356 180.0 1.303991 0.249423 0.691246 1.170493 1.302924 1.434603 2.371870
IISNP112 155.0 0.240413 0.239846 -0.000220 -0.000154 0.427726 0.480977 0.499477 180.0 5789.894444 2608.553514 2008.0 4167.50 5143.0 6612.00 17775.0 180.0 2817.255556 2404.026513 0.0 1509.75 2489.5 3860.25 14181.0 180.0 0.501489 0.338876 0.000000 0.462003 0.512233 0.555391 1.000000 180.0 0.497728 0.338564 0.000000 0.456136 0.507065 0.553678 1.000000 155.0 0.000179 0.000018 0.000147 0.000165 0.000179 0.000190 0.000228 180.0 0.260063 0.238637 0.000000 0.000000 0.449871 0.482796 0.499883 180.0 0.256675 0.235507 0.000000 0.000000 0.445636 0.476039 0.495664 180.0 75.050000 84.056796 0.0 9.75 47.0 111.00 462.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.012810 0.012994 0.000000 0.002100 0.009006 0.019791 0.062951 180.0 0.987190 0.012994 0.937049 0.980209 0.990994 0.997900 1.000000 180.0 5714.844444 2582.356664 2008.0 4166.00 5066.5 6456.50 17570.0 180.0 2897.588889 2670.817902 0.0 1469.75 2507.0 3726.50 17570.0 180.0 0.498511 0.338876 0.000000 0.444609 0.487767 0.537997 1.000000 180.0 0.489461 0.330756 0.000000 0.442829 0.481729 0.532477 0.998217 180.0 0.778958 0.254229 0.361506 0.627537 0.748189 0.827499 1.801782
IISNP113 160.0 0.255774 0.224149 -0.000235 0.000297 0.371636 0.467598 0.499104 180.0 5102.161111 1831.001338 1762.0 3786.25 4909.0 5973.75 11468.0 180.0 3213.566667 1938.577391 0.0 1930.00 2861.0 4149.75 11462.0 180.0 0.634540 0.292339 0.000000 0.471575 0.531607 0.999226 1.000000 180.0 0.634287 0.292273 0.000000 0.471137 0.531492 0.998875 1.000000 160.0 0.000180 0.000019 0.000144 0.000165 0.000178 0.000192 0.000235 180.0 0.268460 0.223057 0.000000 0.000602 0.403549 0.468785 0.499858 180.0 0.268327 0.222947 0.000000 0.000602 0.403158 0.468594 0.499575 180.0 2.377778 3.213372 0.0 0.00 1.0 3.00 17.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000446 0.000616 0.000000 0.000000 0.000257 0.000618 0.004832 180.0 0.999554 0.000616 0.995168 0.999382 0.999743 1.000000 1.000000 180.0 5099.783333 1829.780108 1762.0 3784.25 4905.5 5972.00 11465.0 180.0 1886.216667 1728.228144 0.0 4.00 1877.0 2927.50 8063.0 180.0 0.365460 0.292339 0.000000 0.000774 0.468393 0.528425 1.000000 180.0 0.365267 0.292170 0.000000 0.000774 0.468293 0.527682 1.000000 180.0 0.688216 0.159786 0.329136 0.575644 0.682324 0.783404 1.192800
IISNP114 152.0 0.283619 0.236432 -0.000199 0.000127 0.463544 0.485376 0.499796 180.0 5415.311111 1575.713708 2054.0 4488.00 5464.0 6525.50 10071.0 180.0 2900.738889 1965.717446 0.0 1759.00 2707.0 3724.75 8519.0 180.0 0.559781 0.318448 0.000000 0.476904 0.510611 0.998717 1.000000 180.0 0.539559 0.306524 0.000000 0.457473 0.491826 0.945357 0.976953 152.0 0.000181 0.000018 0.000143 0.000165 0.000180 0.000193 0.000235 180.0 0.280006 0.237351 0.000000 0.000328 0.461309 0.485961 0.500000 180.0 0.270172 0.229014 0.000000 0.000320 0.445709 0.469106 0.487755 180.0 189.061111 78.286479 18.0 133.75 178.5 231.25 520.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.034852 0.009885 0.005141 0.028879 0.033471 0.040029 0.068671 180.0 0.965148 0.009885 0.931329 0.959971 0.966529 0.971121 0.994859 180.0 5226.250000 1521.173352 1985.0 4309.00 5267.5 6236.75 9757.0 180.0 2325.511111 1993.110089 0.0 4.00 2305.0 3182.75 9299.0 180.0 0.440219 0.318448 0.000000 0.001283 0.489389 0.523096 1.000000 180.0 0.425590 0.308774 0.000000 0.001250 0.472320 0.506712 0.983843 180.0 0.740279 0.163076 0.387173 0.644253 0.752822 0.830810 1.372592
IISNP115 160.0 0.184351 0.221098 -0.000205 0.000256 0.001491 0.441303 0.498972 180.0 5109.288889 1699.845591 1527.0 3998.00 5093.0 6184.75 9315.0 180.0 3288.933333 2270.817161 1.0 1681.25 2815.0 4948.50 9054.0 180.0 0.641935 0.355274 0.000193 0.436544 0.498554 0.999555 1.000000 180.0 0.641012 0.354773 0.000193 0.434652 0.498050 0.997944 1.000000 160.0 0.000181 0.000018 0.000143 0.000165 0.000180 0.000193 0.000235 180.0 0.189342 0.222329 0.000000 0.000435 0.001651 0.445857 0.499138 180.0 0.189066 0.222012 0.000000 0.000435 0.001651 0.445258 0.498708 180.0 6.361111 5.807685 0.0 2.00 5.0 8.00 38.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001306 0.001436 0.000000 0.000493 0.001041 0.001635 0.013056 180.0 0.998694 0.001436 0.986944 0.998365 0.998959 0.999507 1.000000 180.0 5102.927778 1698.131754 1527.0 3991.00 5083.0 6178.25 9309.0 180.0 1813.994444 2071.952029 0.0 2.75 1613.0 3032.00 8379.0 180.0 0.358065 0.355274 0.000000 0.000445 0.501446 0.563456 0.999807 180.0 0.357682 0.355013 0.000000 0.000444 0.500940 0.561564 0.999502 180.0 0.697437 0.183592 0.277304 0.563650 0.708875 0.834627 1.055823
IISNP116 160.0 0.176409 0.234594 -0.000228 -0.000019 0.000267 0.482721 0.499755 180.0 12872.833333 3740.520173 5733.0 9864.00 12241.5 15384.75 24018.0 180.0 3412.288889 4848.772876 0.0 2.00 6.5 6311.00 19748.0 180.0 0.256790 0.332884 0.000000 0.000137 0.000462 0.503876 1.000000 180.0 0.256729 0.332809 0.000000 0.000137 0.000462 0.503803 0.999912 160.0 0.000180 0.000019 0.000143 0.000165 0.000179 0.000193 0.000228 180.0 0.156985 0.227984 0.000000 0.000131 0.000360 0.480543 0.499956 180.0 0.156946 0.227927 0.000000 0.000131 0.000360 0.480484 0.499913 180.0 3.394444 4.961863 0.0 0.00 2.0 4.00 45.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000261 0.000360 0.000000 0.000000 0.000179 0.000340 0.002830 180.0 0.999739 0.000360 0.997170 0.999660 0.999821 1.000000 1.000000 180.0 12869.438889 3739.505384 5733.0 9861.25 12236.5 15377.25 24014.0 180.0 9457.150000 5285.202619 0.0 5731.50 9336.0 12935.75 24008.0 180.0 0.743210 0.332884 0.000000 0.496124 0.999538 0.999863 1.000000 180.0 0.743009 0.332790 0.000000 0.496095 0.999049 0.999638 1.000000 180.0 1.744546 0.269751 1.226642 1.536823 1.700849 1.915374 2.732149
IISNP117 119.0 0.200824 0.171980 -0.000219 -0.000169 0.296247 0.348918 0.460519 180.0 2218.322222 1826.310001 41.0 870.00 1796.5 2877.50 12747.0 180.0 1697.544444 1714.996273 0.0 599.50 1243.0 2201.75 12739.0 180.0 0.705201 0.271694 0.000000 0.641042 0.677685 1.000000 1.000000 180.0 0.704398 0.271354 0.000000 0.640900 0.677685 0.997992 1.000000 119.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000198 0.000228 180.0 0.205988 0.170980 0.000000 0.000000 0.292268 0.347778 0.493827 180.0 0.205770 0.170805 0.000000 0.000000 0.291951 0.346930 0.493827 180.0 2.494444 4.701714 0.0 0.00 1.0 3.00 30.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001102 0.002185 0.000000 0.000000 0.000260 0.001336 0.019157 180.0 0.998898 0.002185 0.980843 0.998664 0.999740 1.000000 1.000000 180.0 2215.827778 1824.574097 41.0 870.00 1794.5 2876.75 12739.0 180.0 518.283333 628.857244 0.0 0.00 334.5 767.75 3049.0 180.0 0.294799 0.271694 0.000000 0.000000 0.322315 0.358958 1.000000 180.0 0.294500 0.271441 0.000000 0.000000 0.322289 0.358878 1.000000 180.0 0.290838 0.207394 0.009289 0.135746 0.260981 0.392547 1.257667
IISNP119 160.0 0.113933 0.202309 -0.000219 0.000175 0.001246 0.010852 0.499652 180.0 4371.794444 1796.355599 1680.0 2972.25 4083.5 5143.75 10067.0 180.0 2761.155556 2309.518177 0.0 933.25 2492.0 4267.25 10057.0 180.0 0.635774 0.412796 0.000000 0.458334 0.990855 0.999368 1.000000 180.0 0.635468 0.412616 0.000000 0.458197 0.990206 0.999016 1.000000 160.0 0.000180 0.000019 0.000143 0.000165 0.000180 0.000192 0.000235 180.0 0.117484 0.204456 0.000000 0.000402 0.001467 0.014421 0.499817 180.0 0.117414 0.204333 0.000000 0.000402 0.001466 0.014413 0.498938 180.0 2.055556 2.625024 0.0 0.00 2.0 3.00 12.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000484 0.000676 0.000000 0.000000 0.000327 0.000714 0.004813 180.0 0.999516 0.000676 0.995187 0.999286 0.999673 1.000000 1.000000 180.0 4369.738889 1795.690503 1680.0 2971.75 4080.0 5143.75 10067.0 180.0 1608.583333 2115.158105 0.0 2.00 30.0 2593.00 9559.0 180.0 0.364226 0.412796 0.000000 0.000632 0.009145 0.541666 1.000000 180.0 0.364048 0.412609 0.000000 0.000632 0.009138 0.541508 1.000000 180.0 0.590346 0.175735 0.262188 0.460229 0.578514 0.696433 1.018439
IISNP12 160.0 0.203271 0.229790 -0.001655 -0.000580 0.000318 0.460335 0.498155 180.0 11986.155556 3731.849284 2561.0 9216.00 12456.0 14491.00 24253.0 180.0 4690.688889 4687.140289 0.0 8.00 4888.0 7463.00 18316.0 180.0 0.375504 0.343214 0.000000 0.000750 0.489171 0.544849 0.999923 180.0 0.375373 0.343071 0.000000 0.000750 0.489015 0.544747 0.999688 160.0 0.001328 0.000289 0.000947 0.001083 0.001192 0.001589 0.002093 180.0 0.218901 0.232215 0.000000 0.000624 0.001883 0.470008 0.499352 180.0 0.218840 0.232151 0.000000 0.000624 0.001882 0.469930 0.499189 180.0 3.022222 4.989324 0.0 0.00 2.0 4.00 51.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000238 0.000339 0.000000 0.000000 0.000155 0.000320 0.003088 180.0 0.999762 0.000339 0.996912 0.999680 0.999845 1.000000 1.000000 180.0 11983.133333 3730.470287 2561.0 9216.00 12455.0 14487.75 24247.0 180.0 7292.444444 4768.617761 1.0 4417.75 6424.5 10899.00 19887.0 180.0 0.624496 0.343214 0.000077 0.455151 0.510829 0.999250 1.000000 180.0 0.624389 0.343194 0.000077 0.455031 0.510667 0.999122 1.000000 180.0 1.645180 0.425888 0.466536 1.401417 1.738667 1.925522 2.758881
IISNP120 160.0 0.321717 0.223181 -0.000186 0.011300 0.466261 0.487265 0.499465 180.0 11346.605556 4114.684608 2303.0 8024.25 11633.0 14081.25 23578.0 180.0 5907.311111 3885.934845 0.0 3437.25 5784.5 7737.75 20869.0 180.0 0.521028 0.278659 0.000000 0.462743 0.493972 0.522798 0.996974 180.0 0.520801 0.278510 0.000000 0.462394 0.493781 0.522653 0.995769 160.0 0.000179 0.000018 0.000143 0.000165 0.000180 0.000192 0.000228 180.0 0.328444 0.220227 0.000000 0.011931 0.466439 0.487529 0.499644 180.0 0.328316 0.220140 0.000000 0.011901 0.466349 0.487379 0.499644 180.0 4.622222 7.886170 0.0 1.00 2.0 5.00 55.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000413 0.000655 0.000000 0.000075 0.000245 0.000439 0.004523 180.0 0.999587 0.000655 0.995477 0.999561 0.999755 0.999925 1.000000 180.0 11341.983333 4113.451781 2303.0 8023.50 11620.5 14074.75 23574.0 180.0 5434.672222 3908.457938 38.0 3026.75 5734.0 7368.00 23559.0 180.0 0.478972 0.278659 0.003026 0.477202 0.506028 0.537257 1.000000 180.0 0.478786 0.278552 0.003022 0.477070 0.505784 0.537019 1.000000 180.0 1.512790 0.334655 0.568931 1.295514 1.553277 1.717388 2.504987
IISNP121 160.0 0.230037 0.239837 -0.000203 0.000026 0.000835 0.480656 0.499543 180.0 5666.061111 1798.642813 1213.0 4133.00 5712.0 6753.50 12019.0 180.0 3202.677778 2419.009827 0.0 1675.25 2912.0 4259.00 12013.0 180.0 0.546977 0.337677 0.000000 0.463072 0.503056 0.999185 1.000000 180.0 0.546771 0.337573 0.000000 0.463013 0.502864 0.998742 1.000000 160.0 0.000180 0.000018 0.000143 0.000167 0.000179 0.000192 0.000228 180.0 0.257492 0.238969 0.000000 0.000271 0.447425 0.484446 0.499733 180.0 0.257381 0.238868 0.000000 0.000271 0.447020 0.484422 0.499702 180.0 2.250000 3.318940 0.0 0.00 1.0 3.00 22.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000388 0.000558 0.000000 0.000000 0.000246 0.000506 0.003542 180.0 0.999612 0.000558 0.996458 0.999494 0.999754 1.000000 1.000000 180.0 5663.811111 1797.914806 1213.0 4130.50 5710.0 6747.50 12014.0 180.0 2461.133333 2013.771820 0.0 4.00 2531.5 3725.50 8539.0 180.0 0.453023 0.337677 0.000000 0.000815 0.496944 0.536928 1.000000 180.0 0.452841 0.337554 0.000000 0.000815 0.496544 0.536858 1.000000 180.0 0.762796 0.138429 0.247512 0.662694 0.753426 0.849815 1.198055
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IISNP76 121.0 0.320593 0.203417 -0.000220 0.011268 0.436598 0.475610 0.499461 180.0 2110.066667 1514.973461 198.0 1098.25 1864.0 2524.00 8952.0 180.0 977.394444 993.702880 0.0 278.50 774.0 1343.50 5311.0 180.0 0.434841 0.256865 0.000000 0.387470 0.484164 0.549034 1.000000 180.0 0.434728 0.256829 0.000000 0.387470 0.484164 0.546793 1.000000 121.0 0.000184 0.000019 0.000144 0.000170 0.000184 0.000198 0.000228 180.0 0.323440 0.197235 0.000000 0.031795 0.432880 0.470616 0.499677 180.0 0.323345 0.197182 0.000000 0.031296 0.432728 0.470589 0.499677 180.0 0.477778 1.776493 0.0 0.00 0.0 0.00 16.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000344 0.001871 0.000000 0.000000 0.000000 0.000000 0.019769 180.0 0.999656 0.001871 0.980231 1.000000 1.000000 1.000000 1.000000 180.0 2109.588889 1514.928159 198.0 1098.25 1864.0 2524.00 8950.0 180.0 1132.194444 903.098986 0.0 517.75 946.0 1429.00 4605.0 180.0 0.565159 0.256865 0.000000 0.450966 0.515836 0.612530 1.000000 180.0 0.564928 0.256687 0.000000 0.449491 0.515836 0.612530 1.000000 180.0 0.289386 0.196902 0.027599 0.155434 0.247490 0.344033 0.993397
IISNP78 0.0 NaN NaN NaN NaN NaN NaN NaN 2.0 2.000000 0.000000 2.0 2.00 2.0 2.00 2.0 2.0 1.000000 1.414214 0.0 0.50 1.0 1.50 2.0 2.0 0.500000 0.707107 0.000000 0.250000 0.500000 0.750000 1.000000 2.0 0.500000 0.707107 0.000000 0.250000 0.500000 0.750000 1.000000 0.0 NaN NaN NaN NaN NaN NaN NaN 2.0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 2.0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 2.0 0.000000 0.000000 0.0 0.00 0.0 0.00 0.0 0.0 NaN NaN NaN NaN NaN NaN NaN 2.0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 2.0 1.000000 0.000000 1.000000 1.000000 1.000000 1.000000 1.000000 2.0 2.000000 0.000000 2.0 2.00 2.0 2.00 2.0 2.0 1.000000 1.414214 0.0 0.50 1.0 1.50 2.0 2.0 0.500000 0.707107 0.000000 0.250000 0.500000 0.750000 1.000000 2.0 0.500000 0.707107 0.000000 0.250000 0.500000 0.750000 1.000000 2.0 0.000254 0.000015 0.000243 0.000249 0.000254 0.000259 0.000264
IISNP79 160.0 0.180868 0.206992 -0.001849 -0.000632 0.000411 0.407461 0.480623 180.0 10622.794444 2653.196036 4659.0 8821.25 10610.5 12290.50 18872.0 180.0 7255.144444 4394.312204 2.0 4650.50 6983.5 10634.00 17756.0 180.0 0.664893 0.339465 0.000161 0.563804 0.608531 0.999014 1.000000 180.0 0.664788 0.339404 0.000161 0.563777 0.608353 0.998793 1.000000 160.0 0.001542 0.000263 0.000838 0.001455 0.001590 0.001718 0.002116 180.0 0.185493 0.207633 0.000000 0.000760 0.001933 0.411914 0.482336 180.0 0.185469 0.207605 0.000000 0.000760 0.001933 0.411914 0.482091 180.0 1.538889 2.138667 0.0 0.00 1.0 2.00 16.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000140 0.000179 0.000000 0.000000 0.000094 0.000219 0.001120 180.0 0.999860 0.000179 0.998880 0.999781 0.999906 1.000000 1.000000 180.0 10621.255556 2652.531472 4659.0 8818.25 10610.5 12289.75 18864.0 180.0 3366.111111 3532.932879 0.0 11.75 3372.0 5091.00 13285.0 180.0 0.335107 0.339465 0.000000 0.000986 0.391469 0.436196 0.999839 180.0 0.335072 0.339439 0.000000 0.000986 0.391355 0.436176 0.999839 180.0 1.453012 0.215574 0.763288 1.321696 1.441277 1.612072 2.061445
IISNP8 160.0 0.260190 0.240227 -0.001310 -0.000921 0.454520 0.486859 0.498851 180.0 9483.727778 3089.777864 1817.0 7170.50 9379.0 11172.00 20436.0 180.0 6876.927778 3049.499360 1817.0 4523.75 6247.0 9222.25 15546.0 180.0 0.732758 0.248353 0.452032 0.503254 0.535691 0.999818 1.000000 180.0 0.732722 0.248352 0.452032 0.503254 0.535663 0.999791 1.000000 160.0 0.001202 0.000230 0.000834 0.001060 0.001110 0.001232 0.001907 180.0 0.259247 0.240567 0.000000 0.000182 0.455625 0.487876 0.499892 180.0 0.259229 0.240551 0.000000 0.000182 0.455546 0.487873 0.499892 180.0 0.533333 1.059145 0.0 0.00 0.0 1.00 6.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000055 0.000106 0.000000 0.000000 0.000000 0.000083 0.000409 180.0 0.999945 0.000106 0.999591 0.999917 1.000000 1.000000 1.000000 180.0 9483.194444 3089.526635 1817.0 7170.00 9378.0 11172.00 20434.0 180.0 2606.266667 2718.032583 0.0 2.00 2660.0 4807.00 10646.0 180.0 0.267242 0.248353 0.000000 0.000182 0.464309 0.496746 0.547968 180.0 0.267224 0.248336 0.000000 0.000182 0.464285 0.496746 0.547968 180.0 1.277638 0.240338 0.370758 1.132952 1.262329 1.375151 2.074910
IISNP80 113.0 0.124141 0.208481 -0.001912 -0.001102 -0.000236 0.421284 0.496430 180.0 1787.272222 1406.022278 96.0 769.75 1353.5 2411.00 6656.0 180.0 1074.255556 1171.313058 0.0 138.25 737.0 1570.75 5393.0 180.0 0.642477 0.409500 0.000000 0.480809 0.993663 1.000000 1.000000 180.0 0.642365 0.409440 0.000000 0.480809 0.993533 0.999422 1.000000 113.0 0.001488 0.000317 0.000929 0.001120 0.001567 0.001734 0.002116 180.0 0.117729 0.202869 0.000000 0.000000 0.001318 0.102833 0.498728 180.0 0.117700 0.202816 0.000000 0.000000 0.001317 0.102833 0.498728 180.0 0.377778 0.981138 0.0 0.00 0.0 0.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000190 0.000565 0.000000 0.000000 0.000000 0.000000 0.003846 180.0 0.999810 0.000565 0.996154 1.000000 1.000000 1.000000 1.000000 180.0 1786.894444 1405.665454 96.0 769.75 1353.5 2410.50 6656.0 180.0 712.638889 1223.907319 0.0 0.00 13.0 907.75 6653.0 180.0 0.357523 0.409500 0.000000 0.000000 0.006337 0.519191 1.000000 180.0 0.357444 0.409413 0.000000 0.000000 0.006337 0.519191 1.000000 180.0 0.231271 0.158353 0.019402 0.111374 0.185791 0.304674 0.701699
IISNP81 160.0 0.147064 0.217301 -0.001912 -0.001231 -0.000693 0.446722 0.497972 180.0 10025.527778 3263.668485 3391.0 7625.25 9341.5 12169.25 19050.0 180.0 1924.094444 2883.182587 0.0 4.00 10.5 4168.25 14320.0 180.0 0.203850 0.289364 0.000000 0.000414 0.000952 0.528567 1.000000 180.0 0.203835 0.289346 0.000000 0.000414 0.000952 0.528567 1.000000 160.0 0.001451 0.000301 0.000838 0.001126 0.001532 0.001689 0.002002 180.0 0.146674 0.215383 0.000000 0.000395 0.000889 0.443995 0.499265 180.0 0.146662 0.215366 0.000000 0.000395 0.000889 0.443887 0.499265 180.0 1.088889 1.525533 0.0 0.00 0.0 2.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000112 0.000161 0.000000 0.000000 0.000000 0.000181 0.000966 180.0 0.999888 0.000161 0.999034 0.999819 1.000000 1.000000 1.000000 180.0 10024.438889 3263.478112 3391.0 7622.75 9340.0 12168.75 19044.0 180.0 8100.344444 4253.890628 0.0 4936.00 7473.5 11290.50 19038.0 180.0 0.796150 0.289364 0.000000 0.471433 0.999048 0.999586 1.000000 180.0 0.796052 0.289316 0.000000 0.471433 0.998863 0.999474 1.000000 180.0 1.352975 0.268340 0.668576 1.160540 1.338330 1.546887 2.111171
IISNP82 142.0 0.324567 0.160929 -0.001227 0.276564 0.399677 0.443205 0.496861 180.0 2026.722222 928.194397 516.0 1416.50 1945.5 2370.75 5934.0 180.0 997.550000 785.796086 0.0 497.75 987.0 1439.25 4417.0 180.0 0.465878 0.262678 0.000000 0.412259 0.555405 0.643807 0.762110 180.0 0.465627 0.262546 0.000000 0.411862 0.555109 0.643269 0.762110 142.0 0.001483 0.000274 0.000834 0.001226 0.001535 0.001700 0.001982 180.0 0.299915 0.172954 0.000000 0.254892 0.383811 0.436404 0.498551 180.0 0.299747 0.172850 0.000000 0.254795 0.383555 0.436386 0.498551 180.0 1.383333 1.529140 0.0 0.00 1.0 2.00 6.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000690 0.000745 0.000000 0.000000 0.000508 0.001068 0.003376 180.0 0.999310 0.000745 0.996624 0.998932 0.999492 1.000000 1.000000 180.0 2025.338889 927.737195 515.0 1416.25 1944.0 2367.75 5931.0 180.0 1027.788889 592.092087 245.0 615.00 835.5 1266.50 3312.0 180.0 0.534122 0.262678 0.237890 0.356193 0.444595 0.587741 1.000000 180.0 0.533684 0.262278 0.237890 0.355900 0.444358 0.587178 1.000000 180.0 0.276155 0.102862 0.084537 0.206841 0.271483 0.325523 0.734235
IISNP83 160.0 0.184521 0.225405 -0.001819 -0.001052 0.000227 0.471324 0.498720 180.0 9588.983333 2872.596222 3276.0 7714.50 9703.5 11457.50 17439.0 180.0 4065.988889 4146.732222 0.0 6.00 3968.5 6534.25 16691.0 180.0 0.409525 0.380198 0.000000 0.000598 0.494121 0.649120 1.000000 180.0 0.409451 0.380142 0.000000 0.000598 0.494071 0.648838 1.000000 160.0 0.001386 0.000327 0.000906 0.001056 0.001484 0.001669 0.002116 180.0 0.181449 0.225256 0.000000 0.000265 0.001708 0.472650 0.499813 180.0 0.181407 0.225202 0.000000 0.000265 0.001708 0.472536 0.499813 180.0 1.655556 2.982860 0.0 0.00 1.0 2.00 33.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000186 0.000395 0.000000 0.000000 0.000104 0.000231 0.004670 180.0 0.999814 0.000395 0.995330 0.999769 0.999896 1.000000 1.000000 180.0 9587.327778 2872.564159 3276.0 7714.50 9703.0 11457.25 17436.0 180.0 5521.338889 3996.780784 0.0 2923.50 5314.0 8345.00 17423.0 180.0 0.590475 0.380198 0.000000 0.350880 0.505879 0.999402 1.000000 180.0 0.590362 0.380136 0.000000 0.350724 0.505828 0.999111 1.000000 180.0 1.308331 0.295939 0.614499 1.145209 1.330666 1.470964 2.378808
IISNP84 160.0 0.211379 0.237482 -0.001343 -0.000322 0.001113 0.476553 0.498286 180.0 11666.872222 3201.199114 4504.0 9194.00 11855.0 13796.25 20340.0 180.0 5353.661111 4940.754904 0.0 15.00 5085.5 8372.75 19612.0 180.0 0.459248 0.380094 0.000000 0.001345 0.508214 0.562019 0.999775 180.0 0.459179 0.380044 0.000000 0.001344 0.508135 0.561972 0.999775 160.0 0.001395 0.000301 0.000905 0.001101 0.001434 0.001638 0.001982 180.0 0.199817 0.235645 0.000000 0.000974 0.002050 0.477163 0.499249 180.0 0.199783 0.235604 0.000000 0.000973 0.002049 0.477060 0.499124 180.0 1.805556 2.124865 0.0 0.00 1.0 3.00 11.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000155 0.000179 0.000000 0.000000 0.000125 0.000224 0.000966 180.0 0.999845 0.000179 0.999034 0.999776 0.999875 1.000000 1.000000 180.0 11665.066667 3200.756600 4502.0 9192.50 11853.5 13791.75 20336.0 180.0 6311.405556 4998.317553 2.0 3010.00 5746.0 9479.00 20307.0 180.0 0.540752 0.380094 0.000225 0.437981 0.491786 0.998655 1.000000 180.0 0.540665 0.380036 0.000225 0.437946 0.491711 0.998539 1.000000 180.0 1.582106 0.218679 0.902083 1.459519 1.599227 1.716847 2.150640
IISNP85 160.0 0.194880 0.225900 -0.001910 -0.001073 -0.000215 0.450250 0.496919 180.0 12051.444444 3262.584009 5364.0 9864.75 11846.0 13496.00 21531.0 180.0 5026.888889 5024.848352 0.0 6.00 5517.0 7844.00 21519.0 180.0 0.395918 0.362027 0.000000 0.000544 0.527147 0.563145 1.000000 180.0 0.395874 0.361990 0.000000 0.000543 0.527086 0.563008 1.000000 160.0 0.001303 0.000284 0.000905 0.001083 0.001160 0.001533 0.002093 180.0 0.198687 0.225078 0.000000 0.000386 0.001215 0.449264 0.498656 180.0 0.198664 0.225052 0.000000 0.000385 0.001215 0.449187 0.498581 180.0 1.250000 1.680898 0.0 0.00 0.0 2.00 11.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000104 0.000142 0.000000 0.000000 0.000000 0.000182 0.000923 180.0 0.999896 0.000142 0.999077 0.999818 1.000000 1.000000 1.000000 180.0 12050.194444 3262.272773 5364.0 9864.75 11844.0 13495.00 21530.0 180.0 7023.305556 4489.853870 0.0 4503.75 6558.5 10627.75 20000.0 180.0 0.604082 0.362027 0.000000 0.436855 0.472853 0.999456 1.000000 180.0 0.604021 0.361995 0.000000 0.436749 0.472798 0.999386 1.000000 180.0 1.638026 0.227379 0.915489 1.525627 1.616738 1.732555 2.479410
IISNP86 160.0 0.138595 0.217960 -0.000228 0.000323 0.001094 0.454195 0.499354 180.0 5442.316667 1733.426024 1830.0 4248.25 5394.0 6360.00 11895.0 180.0 3358.311111 2584.866903 0.0 1438.75 3027.0 5228.50 10193.0 180.0 0.614432 0.406437 0.000000 0.448919 0.518658 0.999372 1.000000 180.0 0.614122 0.406252 0.000000 0.448841 0.518150 0.998904 1.000000 160.0 0.000180 0.000019 0.000144 0.000165 0.000179 0.000193 0.000235 180.0 0.139526 0.218385 0.000000 0.000422 0.001153 0.459071 0.499569 180.0 0.139440 0.218250 0.000000 0.000422 0.001153 0.458935 0.499225 180.0 2.527778 3.055228 0.0 0.00 2.0 4.00 18.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000460 0.000525 0.000000 0.000000 0.000312 0.000675 0.002197 180.0 0.999540 0.000525 0.997803 0.999325 0.999688 1.000000 1.000000 180.0 5439.788889 1732.444854 1830.0 4246.75 5393.0 6359.00 11889.0 180.0 2081.477778 2392.672320 0.0 3.75 1810.0 3495.50 11883.0 180.0 0.385568 0.406437 0.000000 0.000628 0.481342 0.551081 1.000000 180.0 0.385418 0.406321 0.000000 0.000628 0.480873 0.550982 1.000000 180.0 0.733174 0.130187 0.379031 0.631239 0.745096 0.818144 1.048854
IISNP87 160.0 0.268264 0.229556 -0.001751 -0.000622 0.442571 0.465393 0.495871 180.0 6757.572222 2191.734871 2033.0 5312.25 6600.0 7975.25 12630.0 180.0 4008.688889 2429.629579 0.0 2514.75 3769.0 5603.75 11289.0 180.0 0.589012 0.294029 0.000000 0.513820 0.540013 0.997487 1.000000 180.0 0.588968 0.294003 0.000000 0.513820 0.539936 0.997464 1.000000 160.0 0.001542 0.000279 0.000906 0.001485 0.001599 0.001733 0.002116 180.0 0.290986 0.224699 0.000000 0.001075 0.448363 0.467490 0.496926 180.0 0.290967 0.224684 0.000000 0.001075 0.448293 0.467453 0.496799 180.0 0.516667 1.038236 0.0 0.00 0.0 0.00 4.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000074 0.000150 0.000000 0.000000 0.000000 0.000000 0.000702 180.0 0.999926 0.000150 0.999298 1.000000 1.000000 1.000000 1.000000 180.0 6757.055556 2191.596624 2033.0 5312.25 6599.0 7974.25 12630.0 180.0 2748.366667 2255.633080 0.0 17.50 2820.0 3791.50 11832.0 180.0 0.410988 0.294029 0.000000 0.002513 0.459987 0.486180 1.000000 180.0 0.410958 0.294005 0.000000 0.002513 0.459922 0.486180 1.000000 180.0 0.910854 0.179033 0.398697 0.813038 0.894006 1.025774 1.366772
IISNP88 157.0 0.138940 0.197836 -0.001808 -0.000418 0.011813 0.401655 0.498348 180.0 3397.055556 1539.742417 870.0 2135.75 3217.5 4273.00 9272.0 180.0 1019.022222 1332.075765 0.0 5.00 191.0 1886.50 5585.0 180.0 0.303114 0.360902 0.000000 0.001540 0.059316 0.476641 1.000000 180.0 0.303058 0.360832 0.000000 0.001539 0.059305 0.476477 1.000000 157.0 0.001495 0.000271 0.000834 0.001231 0.001556 0.001692 0.002093 180.0 0.139139 0.195660 0.000000 0.001171 0.025166 0.399592 0.499331 180.0 0.139116 0.195627 0.000000 0.001171 0.025166 0.399592 0.499331 180.0 0.633333 0.908679 0.0 0.00 0.0 1.00 4.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000164 0.000224 0.000000 0.000000 0.000000 0.000316 0.000763 180.0 0.999836 0.000224 0.999237 0.999684 1.000000 1.000000 1.000000 180.0 3396.422222 1539.252681 870.0 2135.00 3216.5 4272.25 9269.0 180.0 2377.400000 1750.321007 0.0 1094.00 2310.0 3462.25 9267.0 180.0 0.696886 0.360902 0.000000 0.523359 0.940684 0.998460 1.000000 180.0 0.696778 0.360849 0.000000 0.523286 0.940505 0.998260 1.000000 180.0 0.461747 0.172885 0.093665 0.315133 0.446162 0.596754 0.832469
IISNP89 160.0 0.075587 0.174614 -0.000350 0.000289 0.000726 0.001723 0.499643 180.0 12428.572222 3217.259749 4363.0 10506.25 12036.0 14518.25 24238.0 180.0 7730.750000 5899.782821 0.0 27.25 8166.0 12351.75 20874.0 180.0 0.619553 0.432902 0.000000 0.002870 0.998174 0.999313 1.000000 180.0 0.619303 0.432770 0.000000 0.002868 0.997529 0.998953 1.000000 160.0 0.000320 0.000034 0.000231 0.000296 0.000324 0.000343 0.000427 180.0 0.094680 0.191246 0.000000 0.000605 0.001068 0.002277 0.500000 180.0 0.094608 0.191101 0.000000 0.000605 0.001068 0.002276 0.499719 180.0 7.883333 8.456444 0.0 2.00 4.0 13.00 45.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000655 0.000701 0.000000 0.000129 0.000420 0.001034 0.003857 180.0 0.999345 0.000701 0.996143 0.998966 0.999580 0.999871 1.000000 180.0 12420.688889 3215.875366 4359.0 10501.25 12031.0 14508.25 24238.0 180.0 4689.938889 5765.947661 0.0 9.00 20.0 8591.00 24221.0 180.0 0.380447 0.432902 0.000000 0.000687 0.001826 0.997130 1.000000 180.0 0.380042 0.432407 0.000000 0.000686 0.001826 0.995964 0.999299 180.0 1.714942 0.361649 0.803003 1.483397 1.717621 1.939924 2.661092
IISNP9 160.0 0.286690 0.227391 -0.001196 -0.000325 0.442326 0.487616 0.498342 180.0 9721.633333 3030.930692 3812.0 7346.25 9470.0 11442.50 17593.0 180.0 3941.677778 3178.047851 0.0 10.75 4283.5 5773.25 14489.0 180.0 0.402383 0.286635 0.000000 0.001064 0.493906 0.517259 0.999517 180.0 0.402331 0.286606 0.000000 0.001064 0.493906 0.517182 0.999517 160.0 0.001307 0.000308 0.000906 0.001050 0.001159 0.001584 0.002002 180.0 0.299028 0.226111 0.000000 0.000867 0.461654 0.488829 0.499320 180.0 0.298985 0.226078 0.000000 0.000867 0.461484 0.488817 0.499231 180.0 1.311111 1.810241 0.0 0.00 1.0 2.00 15.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000135 0.000175 0.000000 0.000000 0.000095 0.000221 0.001126 180.0 0.999865 0.000175 0.998874 0.999779 0.999905 1.000000 1.000000 180.0 9720.322222 3030.529617 3811.0 7346.25 9470.0 11441.75 17593.0 180.0 5778.644444 3346.167830 5.0 3649.00 5107.5 7359.25 16309.0 180.0 0.597617 0.286635 0.000483 0.482741 0.506094 0.998936 1.000000 180.0 0.597533 0.286597 0.000483 0.482670 0.506094 0.998634 1.000000 180.0 1.309471 0.218422 0.796604 1.160596 1.275438 1.450787 1.939854
IISNP90 160.0 0.160571 0.171514 -0.001426 0.000155 0.003686 0.339016 0.408685 180.0 8246.733333 3262.841926 2500.0 6030.00 7696.0 9548.75 24305.0 180.0 6737.050000 3759.005961 3.0 4312.50 6027.0 8763.00 24270.0 180.0 0.784939 0.222578 0.000691 0.654556 0.683133 0.998645 0.999805 180.0 0.784842 0.222583 0.000690 0.654502 0.682928 0.998510 0.999805 160.0 0.001072 0.000148 0.000838 0.001005 0.001048 0.001108 0.002116 180.0 0.182007 0.171757 0.000195 0.001327 0.309164 0.342323 0.409763 180.0 0.181973 0.171724 0.000195 0.001327 0.309022 0.342150 0.409670 180.0 1.050000 1.480884 0.0 0.00 0.0 2.00 10.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000137 0.000196 0.000000 0.000000 0.000000 0.000248 0.001202 180.0 0.999863 0.000196 0.998798 0.999752 1.000000 1.000000 1.000000 180.0 8245.683333 3262.685987 2500.0 6028.00 7695.0 9547.25 24303.0 180.0 1508.633333 1601.811404 1.0 13.00 1551.0 2494.75 8232.0 180.0 0.215061 0.222578 0.000195 0.001355 0.316867 0.345444 0.999309 180.0 0.215022 0.222538 0.000195 0.001355 0.316771 0.345415 0.998850 180.0 1.110190 0.304124 0.613316 0.903432 1.042473 1.250378 2.633375
IISNP91 91.0 0.200297 0.223968 -0.001966 -0.001259 0.000241 0.442218 0.488362 180.0 1440.705556 1103.228349 148.0 674.75 1194.5 1758.25 6738.0 180.0 437.544444 693.341906 0.0 0.00 2.0 718.50 4139.0 180.0 0.292708 0.347464 0.000000 0.000000 0.003246 0.555268 1.000000 180.0 0.292674 0.347426 0.000000 0.000000 0.003246 0.554963 1.000000 91.0 0.001358 0.000337 0.000906 0.001052 0.001167 0.001673 0.002002 180.0 0.157893 0.215058 0.000000 0.000000 0.001544 0.434182 0.495495 180.0 0.157873 0.215031 0.000000 0.000000 0.001544 0.434182 0.495495 180.0 0.266667 0.697962 0.0 0.00 0.0 0.00 5.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000207 0.000669 0.000000 0.000000 0.000000 0.000000 0.005525 180.0 0.999793 0.000669 0.994475 1.000000 1.000000 1.000000 1.000000 180.0 1440.438889 1103.075853 148.0 674.75 1193.5 1756.75 6737.0 180.0 1002.894444 963.577004 0.0 403.75 723.0 1263.75 5775.0 180.0 0.707292 0.347464 0.000000 0.444732 0.996754 1.000000 1.000000 180.0 0.707119 0.347350 0.000000 0.444732 0.996495 1.000000 1.000000 180.0 0.189018 0.119675 0.029148 0.103352 0.155572 0.247954 0.687672
IISNP92 160.0 0.378315 0.183494 -0.001300 0.362222 0.471235 0.486433 0.498821 180.0 9237.922222 2923.567193 3609.0 7300.25 8809.0 10815.50 18937.0 180.0 4085.794444 2413.020495 0.0 2935.75 4194.0 5388.75 11819.0 180.0 0.435142 0.216945 0.000000 0.458972 0.508324 0.526865 0.999558 180.0 0.435079 0.216911 0.000000 0.458913 0.508170 0.526716 0.999523 160.0 0.001402 0.000324 0.000838 0.001062 0.001497 0.001687 0.002116 180.0 0.374536 0.188324 0.000000 0.362854 0.472018 0.487337 0.499895 180.0 0.374483 0.188298 0.000000 0.362816 0.471988 0.487166 0.499895 180.0 1.316667 1.676239 0.0 0.00 1.0 2.00 9.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000144 0.000192 0.000000 0.000000 0.000103 0.000216 0.001127 180.0 0.999856 0.000192 0.998873 0.999784 0.999897 1.000000 1.000000 180.0 9236.605556 2923.243283 3607.0 7297.75 8809.0 10813.50 18935.0 180.0 5150.811111 2358.185165 3.0 3615.25 4608.0 6321.00 13670.0 180.0 0.564858 0.216945 0.000442 0.473135 0.491676 0.541028 1.000000 180.0 0.564777 0.216911 0.000442 0.473001 0.491567 0.540959 1.000000 180.0 1.252187 0.241363 0.644183 1.085005 1.214423 1.345689 2.013212
IISNP93 160.0 0.096555 0.193329 -0.000213 -0.000040 0.000234 0.001306 0.499176 180.0 8362.950000 3718.250442 2522.0 6152.00 7626.5 9585.75 24428.0 180.0 3455.655556 4077.875800 0.0 2.00 2067.5 6591.00 21794.0 180.0 0.419548 0.431382 0.000000 0.000266 0.464619 0.999185 1.000000 180.0 0.419224 0.431120 0.000000 0.000265 0.464196 0.998316 1.000000 160.0 0.000180 0.000017 0.000144 0.000165 0.000180 0.000192 0.000220 180.0 0.112139 0.203278 0.000000 0.000133 0.000427 0.001754 0.499325 180.0 0.111993 0.203013 0.000000 0.000133 0.000427 0.001749 0.498905 180.0 12.094444 14.866143 0.0 4.00 9.0 16.00 130.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001546 0.002228 0.000000 0.000601 0.001095 0.001773 0.019608 180.0 0.998454 0.002228 0.980392 0.998227 0.998905 0.999399 1.000000 180.0 8350.855556 3715.931131 2522.0 6147.75 7623.0 9566.75 24412.0 180.0 4895.200000 4590.891731 0.0 6.00 4554.5 7980.75 21693.0 180.0 0.580452 0.431382 0.000000 0.000815 0.535381 0.999734 1.000000 180.0 0.579230 0.430367 0.000000 0.000815 0.534982 0.997876 0.999775 180.0 1.192295 0.667759 0.433076 0.857340 1.006292 1.165251 4.202729
IISNP94 160.0 0.144808 0.221907 -0.000235 -0.000146 0.000196 0.469044 0.499750 180.0 13327.183333 3591.671675 5230.0 10579.25 13023.0 15513.75 24616.0 180.0 4425.433333 5543.325841 0.0 0.00 7.5 7599.75 21007.0 180.0 0.336372 0.389649 0.000000 0.000000 0.000593 0.527868 1.000000 180.0 0.336308 0.389575 0.000000 0.000000 0.000593 0.527818 1.000000 160.0 0.000180 0.000019 0.000145 0.000165 0.000180 0.000192 0.000235 180.0 0.139585 0.219375 0.000000 0.000000 0.000319 0.468182 0.499936 180.0 0.139558 0.219332 0.000000 0.000000 0.000319 0.467968 0.499807 180.0 3.088889 4.700278 0.0 0.00 2.0 4.00 47.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000222 0.000285 0.000000 0.000000 0.000160 0.000320 0.002604 180.0 0.999778 0.000285 0.997396 0.999680 0.999840 1.000000 1.000000 180.0 13324.094444 3590.181400 5228.0 10578.50 13022.0 15508.25 24606.0 180.0 8898.661111 6037.491159 0.0 4694.75 8911.0 13404.75 24606.0 180.0 0.663628 0.389649 0.000000 0.472132 0.999407 1.000000 1.000000 180.0 0.663471 0.389548 0.000000 0.472087 0.998654 0.999684 1.000000 180.0 1.813141 0.263887 0.856835 1.648142 1.798063 1.933380 2.793386
IISNP95 160.0 0.180296 0.233453 -0.000219 -0.000162 0.000417 0.475961 0.498911 180.0 4519.000000 1473.212220 1524.0 3482.00 4304.0 5470.25 9675.0 180.0 2338.805556 1861.239775 0.0 3.00 2363.5 3485.25 7397.0 180.0 0.526038 0.383940 0.000000 0.000863 0.497595 0.999345 1.000000 180.0 0.525691 0.383798 0.000000 0.000863 0.497071 0.998674 1.000000 160.0 0.000180 0.000018 0.000144 0.000166 0.000180 0.000192 0.000220 180.0 0.197666 0.237013 0.000000 0.000000 0.000711 0.478295 0.499098 180.0 0.197455 0.236761 0.000000 0.000000 0.000710 0.478111 0.499016 180.0 4.177778 4.192512 0.0 1.00 3.0 6.00 28.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000924 0.000957 0.000000 0.000295 0.000765 0.001242 0.006929 180.0 0.999076 0.000957 0.993071 0.998758 0.999235 0.999705 1.000000 180.0 4514.822222 1471.995313 1524.0 3481.00 4303.5 5463.25 9663.0 180.0 2176.016667 1955.149626 0.0 2.00 2149.5 3379.75 9663.0 180.0 0.473962 0.383940 0.000000 0.000655 0.502405 0.999137 1.000000 180.0 0.473385 0.383433 0.000000 0.000655 0.501876 0.996260 0.999757 180.0 0.619315 0.164257 0.255157 0.512317 0.605839 0.706676 1.121069
IISNP96 160.0 0.230205 0.240125 -0.000235 -0.000090 0.000270 0.480335 0.499127 180.0 14398.200000 3465.611056 2004.0 12156.00 14337.5 16509.50 24696.0 180.0 9720.805556 4802.088116 1.0 6902.25 8741.0 13414.50 24694.0 180.0 0.686304 0.299491 0.000046 0.503941 0.534759 0.999883 1.000000 180.0 0.686168 0.299460 0.000046 0.503831 0.534611 0.999761 1.000000 160.0 0.000182 0.000019 0.000144 0.000166 0.000181 0.000196 0.000235 180.0 0.242399 0.240559 0.000000 0.000099 0.429980 0.484485 0.499313 180.0 0.242334 0.240495 0.000000 0.000099 0.429928 0.484444 0.499254 180.0 3.216667 3.909986 0.0 0.00 2.0 4.00 26.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000223 0.000273 0.000000 0.000000 0.000152 0.000295 0.001805 180.0 0.999777 0.000273 0.998195 0.999705 0.999848 1.000000 1.000000 180.0 14394.983333 3465.135915 2004.0 12155.25 14336.5 16505.00 24694.0 180.0 4674.177778 4743.994449 0.0 2.00 5414.0 7816.00 21640.0 180.0 0.313696 0.299491 0.000000 0.000117 0.465241 0.496059 0.999954 180.0 0.313608 0.299402 0.000000 0.000117 0.465113 0.495951 0.999935 180.0 1.977333 0.313715 0.228981 1.784816 1.985249 2.207706 2.810467
IISNP97 160.0 0.198572 0.216164 -0.000184 0.000446 0.001765 0.426840 0.499486 180.0 11215.211111 3610.441266 2900.0 8578.00 10846.0 13400.00 23324.0 180.0 3849.744444 3800.119357 0.0 8.00 3735.5 5719.50 16304.0 180.0 0.348734 0.317645 0.000000 0.000807 0.360270 0.510560 0.999513 180.0 0.348485 0.317387 0.000000 0.000806 0.360128 0.510389 0.999116 160.0 0.000179 0.000018 0.000143 0.000166 0.000178 0.000191 0.000228 180.0 0.223019 0.216242 0.000000 0.000677 0.328228 0.454022 0.499698 180.0 0.222877 0.216106 0.000000 0.000676 0.328030 0.453841 0.499498 180.0 7.422222 6.245406 0.0 3.00 6.0 10.00 43.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000659 0.000527 0.000000 0.000326 0.000517 0.000882 0.003420 180.0 0.999341 0.000527 0.996580 0.999118 0.999483 0.999674 1.000000 180.0 11207.788889 3608.203169 2899.0 8569.75 10842.0 13394.00 23321.0 180.0 7358.044444 4560.188072 6.0 4444.25 6670.5 10633.25 22631.0 180.0 0.651266 0.317645 0.000487 0.489440 0.639730 0.999193 1.000000 180.0 0.650856 0.317449 0.000486 0.489087 0.639478 0.998441 1.000000 180.0 1.508114 0.257719 0.744155 1.319080 1.527237 1.675380 2.355646
IISNP98 160.0 0.276461 0.217102 -0.000198 0.000469 0.421802 0.459635 0.499489 180.0 7640.716667 1898.320641 3435.0 6257.25 7660.0 9013.00 12288.0 180.0 4376.588889 2704.935420 1.0 2864.75 4267.5 5502.50 12284.0 180.0 0.573608 0.308256 0.000122 0.492447 0.542010 0.997101 1.000000 180.0 0.573489 0.308203 0.000122 0.492241 0.541940 0.996791 1.000000 160.0 0.000181 0.000019 0.000143 0.000166 0.000179 0.000193 0.000235 180.0 0.271935 0.219468 0.000000 0.000627 0.421979 0.461356 0.499669 180.0 0.271873 0.219417 0.000000 0.000627 0.421902 0.461277 0.499614 180.0 1.788889 2.608514 0.0 0.00 1.0 2.00 21.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000224 0.000286 0.000000 0.000000 0.000164 0.000291 0.001928 180.0 0.999776 0.000286 0.998072 0.999709 0.999836 1.000000 1.000000 180.0 7638.927778 1897.532862 3434.0 6255.50 7660.0 9008.75 12287.0 180.0 3262.338889 2544.570024 0.0 25.25 3378.5 4593.75 10221.0 180.0 0.426392 0.308256 0.000000 0.002899 0.457990 0.507553 0.999878 180.0 0.426287 0.308172 0.000000 0.002899 0.457930 0.507341 0.999878 180.0 1.041497 0.135165 0.798011 0.937487 1.033364 1.142928 1.527022
IISNP99 160.0 0.251175 0.239850 -0.000219 0.000081 0.446573 0.481980 0.499796 180.0 10246.255556 2451.692673 4392.0 8259.50 10374.5 12106.50 15518.0 180.0 5595.816667 3788.073282 0.0 3582.25 5587.0 7554.25 14999.0 180.0 0.545541 0.343848 0.000000 0.467842 0.507171 0.999380 1.000000 180.0 0.545351 0.343718 0.000000 0.467742 0.506945 0.998794 1.000000 160.0 0.000180 0.000018 0.000144 0.000166 0.000178 0.000191 0.000220 180.0 0.250398 0.240141 0.000000 0.000265 0.446758 0.483118 0.499947 180.0 0.250317 0.240064 0.000000 0.000265 0.446652 0.483017 0.499894 180.0 3.694444 3.812794 0.0 1.00 3.0 5.00 20.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000352 0.000396 0.000000 0.000077 0.000286 0.000469 0.003030 180.0 0.999648 0.000396 0.996970 0.999531 0.999714 0.999923 1.000000 180.0 10242.561111 2450.454429 4392.0 8254.25 10373.5 12101.75 15515.0 180.0 4646.744444 3671.428355 0.0 5.75 5042.5 6669.25 14556.0 180.0 0.454459 0.343848 0.000000 0.000620 0.492829 0.532158 1.000000 180.0 0.454297 0.343713 0.000000 0.000620 0.492634 0.532044 1.000000 180.0 1.402202 0.202970 0.819258 1.261200 1.417866 1.531932 1.895755

265 rows × 136 columns

In [64]:
AV_SNP_stats.to_csv('AV_SNP_error_background(+more)_general_stats.csv')
In [21]:
SNP_cov['SNP_NAME'] = SNP_cov.index
In [22]:
missing_snps = SNP_cov[~SNP_cov.index.isin(AV_SNP_stats.index)]
In [23]:
for ghost_snp in missing_snps.index:
    AV_SNP_stats.loc[ghost_snp,:] = np.nan
In [24]:
AV_SNP_stats
Out[24]:
ADJUSTEDFREQUENCY ALL_READS ALT_COUNT ALT_FREQ ALT_FREQ_TOTAL BACKGROUND DONORFREQUENCY DONORFREQUENCYTOTAL ERR_COUNT ERR_FREQ_FIXED ERR_FREQ_TOTAL REFALTFRACTION REF_ALT_READS REF_COUNT REF_FREQ REF_FREQ_TOTAL RELATIVE_COVERAGE
count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max count mean std min 25% 50% 75% max
SNP_NAME
IISNP1 160.0 0.131740 0.201029 -0.000228 -0.000155 0.000303 0.353112 0.499579 180.0 3595.772222 1375.354458 1136.0 2685.00 3553.5 4373.25 12089.0 180.0 2822.655556 1628.832122 0.0 1733.75 2556.5 3857.25 12052.0 180.0 0.792703 0.300662 0.000000 0.502526 0.999424 1.000000 1.000000 180.0 0.792463 0.300575 0.000000 0.502526 0.999158 0.999710 1.000000 160.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000194 0.000235 180.0 0.133104 0.202945 0.0 0.000000 0.000466 0.361941 0.499751 180.0 0.133063 0.202885 0.0 0.000000 0.000466 0.361793 0.499751 180.0 1.033333 1.931509 0.0 0.00 0.0 1.00 13.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000300 0.000625 0.000000 0.000000 0.000000 0.000383 0.005100 180.0 0.999700 0.000625 0.994900 0.999617 1.000000 1.000000 1.000000 180.0 3594.738889 1375.091129 1136.0 2685.00 3553.5 4372.00 12087.0 180.0 772.083333 1204.692134 0.0 0.00 2.0 1525.25 5147.0 180.0 0.207297 0.300662 0.000000 0.000000 0.000576 0.497474 1.000000 180.0 0.207237 0.300579 0.000000 0.000000 0.000576 0.497474 1.000000 180.0 0.488795 0.149135 0.201477 0.390143 0.482366 0.573925 1.375175
IISNP10 53.0 0.251690 0.240454 -0.000379 -0.000321 0.445130 0.480009 0.498052 180.0 1009.005556 759.032260 26.0 526.00 761.5 1233.25 4153.0 180.0 280.238889 398.630510 0.0 0.00 95.0 424.25 2203.0 180.0 0.284186 0.300977 0.000000 0.000000 0.359272 0.502253 1.000000 180.0 0.284094 0.300881 0.000000 0.000000 0.359272 0.502100 1.000000 53.0 0.000336 0.000036 0.000236 0.000317 0.000332 0.000349 0.000435 180.0 0.208757 0.228312 0.0 0.000000 0.003038 0.466164 0.498994 180.0 0.208687 0.228231 0.0 0.000000 0.003033 0.465101 0.498994 180.0 0.400000 1.054917 0.0 0.00 0.0 0.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000366 0.001044 0.000000 0.000000 0.000000 0.000000 0.008475 180.0 0.999634 0.001044 0.991525 1.000000 1.000000 1.000000 1.000000 180.0 1008.605556 758.735279 26.0 526.00 761.5 1233.00 4153.0 180.0 728.366667 638.123374 0.0 311.25 553.0 973.25 3734.0 180.0 0.715814 0.300977 0.000000 0.497747 0.640728 1.000000 1.000000 180.0 0.715540 0.300842 0.000000 0.497594 0.640728 0.999611 1.000000 180.0 0.137662 0.098490 0.005890 0.074357 0.103696 0.174699 0.534824
IISNP100 160.0 0.262789 0.241652 -0.000216 -0.000026 0.464466 0.486461 0.499607 180.0 5093.600000 1388.917876 1573.0 4141.25 4993.5 5709.50 9906.0 180.0 1738.822222 1530.142653 0.0 1.00 2049.0 2760.75 5467.0 180.0 0.349730 0.296289 0.000000 0.000193 0.488292 0.515357 1.000000 180.0 0.349629 0.296207 0.000000 0.000193 0.488292 0.515186 1.000000 160.0 0.000181 0.000018 0.000144 0.000166 0.000180 0.000193 0.000235 180.0 0.271129 0.240459 0.0 0.000184 0.466634 0.486767 0.499807 180.0 0.271050 0.240389 0.0 0.000184 0.466366 0.486628 0.499615 180.0 1.466667 1.779461 0.0 0.00 1.0 2.00 14.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000282 0.000325 0.000000 0.000000 0.000230 0.000412 0.002644 180.0 0.999718 0.000325 0.997356 0.999588 0.999770 1.000000 1.000000 180.0 5092.133333 1388.351216 1571.0 4139.50 4993.0 5706.75 9906.0 180.0 3353.311111 1778.830183 0.0 2144.00 2865.5 4712.75 8266.0 180.0 0.650270 0.296289 0.000000 0.484643 0.511708 0.999807 1.000000 180.0 0.650089 0.296214 0.000000 0.484533 0.511708 0.999560 1.000000 180.0 0.695763 0.115497 0.262213 0.626391 0.684805 0.770081 0.954757
IISNP101 159.0 0.223176 0.219114 -0.000207 -0.000039 0.301633 0.442615 0.499027 180.0 9205.144444 4186.200216 138.0 6350.75 8153.0 11545.50 22461.0 180.0 3854.461111 3866.347231 0.0 3.00 3704.5 5596.75 18944.0 180.0 0.409406 0.330555 0.000000 0.000341 0.519460 0.577214 1.000000 180.0 0.409234 0.330435 0.000000 0.000341 0.519179 0.577024 1.000000 159.0 0.000180 0.000018 0.000144 0.000165 0.000179 0.000193 0.000228 180.0 0.238929 0.221316 0.0 0.000160 0.311601 0.453455 0.500000 180.0 0.238817 0.221210 0.0 0.000160 0.311532 0.452763 0.499925 180.0 4.683333 4.771277 0.0 1.00 3.0 6.25 27.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000492 0.000418 0.000000 0.000182 0.000385 0.000712 0.002224 180.0 0.999508 0.000418 0.997776 0.999288 0.999615 0.999818 1.000000 180.0 9200.461111 4183.971408 138.0 6349.50 8150.5 11537.25 22460.0 180.0 5346.000000 3978.231859 0.0 2944.75 4464.5 6949.50 18602.0 180.0 0.590594 0.330555 0.000000 0.422786 0.480540 0.999659 1.000000 180.0 0.590274 0.330345 0.000000 0.422646 0.480291 0.998979 1.000000 180.0 1.230206 0.415430 0.020206 0.935237 1.184647 1.453349 2.800127
IISNP102 154.0 0.307819 0.233596 -0.000220 0.000208 0.476467 0.489669 0.499281 180.0 11814.683333 2747.959199 4770.0 9740.75 11796.0 13685.25 17589.0 180.0 7065.794444 3572.885030 1.0 5029.25 6327.5 8604.75 16611.0 180.0 0.619883 0.279085 0.000111 0.494869 0.514725 0.999421 1.000000 180.0 0.602202 0.271028 0.000111 0.491056 0.513230 0.998947 1.000000 154.0 0.000181 0.000019 0.000144 0.000167 0.000182 0.000192 0.000235 180.0 0.305934 0.233386 0.0 0.000437 0.474149 0.487590 0.499425 180.0 0.305790 0.233307 0.0 0.000408 0.473624 0.487493 0.499141 180.0 232.944444 1253.389642 0.0 1.00 3.0 6.00 9089.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.017853 0.094499 0.000000 0.000091 0.000260 0.000504 0.542402 180.0 0.982147 0.094499 0.457598 0.999496 0.999740 0.999909 1.000000 180.0 11581.738889 2887.734045 4645.0 9348.75 11617.0 13574.75 17571.0 180.0 4515.944444 3499.967433 0.0 7.00 5100.5 6694.50 14474.0 180.0 0.380117 0.279085 0.000000 0.000579 0.485275 0.505131 0.999889 180.0 0.379946 0.278998 0.000000 0.000549 0.484990 0.505064 0.999492 180.0 1.615908 0.202820 1.045401 1.489849 1.599965 1.735257 2.248545
IISNP103 160.0 0.233118 0.242007 -0.000200 0.000436 0.004063 0.488260 0.499552 180.0 8170.227778 2210.992971 2749.0 6592.50 8135.5 9521.25 15863.0 180.0 4465.600000 3230.227200 0.0 2408.50 4509.0 6561.75 12387.0 180.0 0.540417 0.357612 0.000000 0.462053 0.503474 0.996258 1.000000 180.0 0.540295 0.357534 0.000000 0.462011 0.503331 0.996188 1.000000 160.0 0.000180 0.000018 0.000143 0.000165 0.000181 0.000192 0.000235 180.0 0.233912 0.241518 0.0 0.000612 0.004510 0.487815 0.499743 180.0 0.233858 0.241462 0.0 0.000612 0.004508 0.487687 0.499743 180.0 1.755556 2.134113 0.0 0.00 1.0 2.00 17.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000214 0.000242 0.000000 0.000000 0.000139 0.000294 0.001553 180.0 0.999786 0.000242 0.998447 0.999706 0.999861 1.000000 1.000000 180.0 8168.472222 2210.405098 2749.0 6591.25 8135.0 9520.25 15860.0 180.0 3702.872222 3075.644855 0.0 31.75 3669.0 5470.25 11512.0 180.0 0.459583 0.357612 0.000000 0.003742 0.496526 0.537947 1.000000 180.0 0.459490 0.357551 0.000000 0.003742 0.496395 0.537899 1.000000 180.0 1.123931 0.240229 0.541998 0.966096 1.114628 1.288552 1.742996
IISNP104 160.0 0.215182 0.230983 -0.000216 -0.000034 0.001103 0.468360 0.499004 180.0 5412.938889 2462.062548 1124.0 3532.50 5224.5 7016.00 12103.0 180.0 2046.061111 2315.334828 0.0 2.00 1556.0 3311.50 10845.0 180.0 0.366227 0.348548 0.000000 0.000317 0.448536 0.514749 1.000000 180.0 0.366190 0.348512 0.000000 0.000317 0.448536 0.514749 1.000000 160.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000196 0.000235 180.0 0.206199 0.229520 0.0 0.000000 0.001040 0.466219 0.499216 180.0 0.206179 0.229498 0.0 0.000000 0.001040 0.466219 0.499216 180.0 0.777778 1.964932 0.0 0.00 0.0 1.00 20.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000149 0.000389 0.000000 0.000000 0.000000 0.000160 0.003561 180.0 0.999851 0.000389 0.996439 0.999840 1.000000 1.000000 1.000000 180.0 5412.161111 2461.813056 1124.0 3532.50 5224.5 7016.00 12103.0 180.0 3366.100000 2508.636457 0.0 1601.75 3071.0 4854.25 12097.0 180.0 0.633773 0.348548 0.000000 0.485251 0.551464 0.999683 1.000000 180.0 0.633662 0.348464 0.000000 0.485251 0.551464 0.999432 1.000000 180.0 0.747092 0.320297 0.204758 0.475692 0.715003 1.016219 1.587612
IISNP105 147.0 0.238100 0.228841 -0.000220 -0.000027 0.321422 0.476655 0.499426 180.0 5940.944444 3953.390391 295.0 2864.50 5066.5 8534.50 18517.0 180.0 2059.961111 2792.138674 0.0 0.00 811.0 3634.00 14868.0 180.0 0.327925 0.322795 0.000000 0.000000 0.494270 0.531233 1.000000 180.0 0.327816 0.322673 0.000000 0.000000 0.494174 0.531113 1.000000 147.0 0.000179 0.000018 0.000144 0.000165 0.000180 0.000191 0.000220 180.0 0.215107 0.228810 0.0 0.000000 0.001651 0.472845 0.499603 180.0 0.215044 0.228746 0.0 0.000000 0.001648 0.472809 0.499107 180.0 2.144444 3.112638 0.0 0.00 1.0 3.00 27.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000364 0.000541 0.000000 0.000000 0.000201 0.000520 0.003384 180.0 0.999636 0.000541 0.996616 0.999480 0.999799 1.000000 1.000000 180.0 5938.800000 3951.778520 295.0 2861.75 5066.5 8530.75 18507.0 180.0 3878.838889 3435.513672 0.0 1386.75 3002.0 5142.75 16645.0 180.0 0.672075 0.322795 0.000000 0.468767 0.505730 1.000000 1.000000 180.0 0.671820 0.322642 0.000000 0.468670 0.505632 0.999596 1.000000 180.0 0.769495 0.432168 0.061647 0.435917 0.735755 1.073280 1.828168
IISNP106 160.0 0.237125 0.223951 -0.000202 0.000294 0.317091 0.478227 0.498721 180.0 9447.544444 2762.565398 3461.0 7353.50 9366.0 11436.75 16873.0 180.0 6857.766667 3519.119595 0.0 4561.75 6229.0 9021.50 16835.0 180.0 0.720753 0.282089 0.000000 0.502819 0.674514 0.999590 1.000000 180.0 0.720216 0.281828 0.000000 0.502312 0.674322 0.998739 0.999860 160.0 0.000178 0.000017 0.000144 0.000164 0.000178 0.000190 0.000219 180.0 0.221369 0.224744 0.0 0.000381 0.294231 0.476127 0.498938 180.0 0.221229 0.224599 0.0 0.000380 0.294051 0.475870 0.498899 180.0 6.944444 6.122330 0.0 3.00 6.0 9.00 37.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000701 0.000519 0.000000 0.000329 0.000613 0.000884 0.002561 180.0 0.999299 0.000519 0.997439 0.999116 0.999387 0.999671 1.000000 180.0 9440.600000 2759.396745 3459.0 7351.50 9364.5 11430.75 16837.0 180.0 2582.833333 2793.560453 0.0 4.00 2452.0 4731.50 12946.0 180.0 0.279247 0.282089 0.000000 0.000410 0.325486 0.497181 1.000000 180.0 0.279083 0.281941 0.000000 0.000410 0.325394 0.496679 0.999614 180.0 1.275795 0.187309 0.567019 1.172218 1.276793 1.393841 1.742488
IISNP107 134.0 0.299548 0.224557 -0.000228 0.000010 0.453292 0.484855 0.499534 180.0 2311.683333 1236.585850 349.0 1310.50 2149.5 2955.25 5765.0 180.0 1511.266667 1131.660744 0.0 785.25 1243.5 1928.00 5443.0 180.0 0.641926 0.247946 0.000000 0.496870 0.530238 0.999081 1.000000 180.0 0.641568 0.247881 0.000000 0.496463 0.530092 0.997723 1.000000 134.0 0.000182 0.000019 0.000144 0.000167 0.000182 0.000197 0.000228 180.0 0.313749 0.216447 0.0 0.000687 0.454880 0.484248 0.500000 180.0 0.313538 0.216295 0.0 0.000687 0.454802 0.484248 0.500000 180.0 1.438889 1.756596 0.0 0.00 1.0 2.00 8.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000631 0.000802 0.000000 0.000000 0.000382 0.001042 0.004090 180.0 0.999369 0.000802 0.995910 0.998958 0.999618 1.000000 1.000000 180.0 2310.244444 1235.931931 349.0 1310.00 2148.0 2953.75 5759.0 180.0 798.977778 717.649460 0.0 2.00 777.5 1266.25 2966.0 180.0 0.358074 0.247946 0.000000 0.000919 0.469762 0.503130 1.000000 180.0 0.357802 0.247693 0.000000 0.000919 0.469606 0.502781 1.000000 180.0 0.306825 0.135149 0.072931 0.207270 0.291607 0.421432 0.642582
IISNP108 9.0 0.154831 0.232613 -0.000192 -0.000175 -0.000161 0.435719 0.485223 180.0 1327.172222 1346.892632 26.0 359.00 904.0 1800.00 7102.0 180.0 382.238889 538.664305 0.0 1.00 167.5 499.50 3067.0 180.0 0.398192 0.297156 0.000000 0.001389 0.487255 0.517125 1.000000 180.0 0.314189 0.276913 0.000000 0.000757 0.342457 0.374525 1.000000 9.0 0.000180 0.000019 0.000160 0.000162 0.000175 0.000192 0.000209 180.0 0.287773 0.231155 0.0 0.000000 0.453526 0.483440 0.500000 180.0 0.207756 0.168809 0.0 0.000000 0.315843 0.345648 0.484594 180.0 405.283333 510.829376 0.0 75.75 210.0 545.50 3350.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.291172 0.138506 0.000000 0.274415 0.300143 0.422748 0.485030 180.0 0.708828 0.138506 0.514970 0.577252 0.699857 0.725585 1.000000 180.0 921.888889 911.255251 23.0 263.75 589.5 1293.75 4190.0 180.0 539.650000 604.052455 0.0 109.75 326.0 806.75 3751.0 180.0 0.601808 0.297156 0.000000 0.482875 0.512745 0.998611 1.000000 180.0 0.394639 0.177056 0.000000 0.346384 0.363728 0.531840 0.971209 180.0 0.172999 0.164543 0.005460 0.051996 0.124346 0.233318 0.840808
IISNP109 160.0 0.154673 0.223555 -0.000228 -0.000014 0.000327 0.467209 0.499343 180.0 9437.022222 3189.843797 2908.0 7429.75 9140.0 11050.25 19909.0 180.0 2285.850000 3204.548490 0.0 2.00 4.5 4438.50 16248.0 180.0 0.246732 0.325469 0.000000 0.000173 0.000513 0.507491 1.000000 180.0 0.246660 0.325384 0.000000 0.000173 0.000512 0.507475 0.999902 160.0 0.000181 0.000019 0.000144 0.000166 0.000180 0.000195 0.000235 180.0 0.153593 0.223081 0.0 0.000162 0.000453 0.467380 0.499541 180.0 0.153543 0.223008 0.0 0.000162 0.000453 0.467305 0.499312 180.0 3.427778 5.145949 0.0 0.00 2.0 4.00 38.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000351 0.000477 0.000000 0.000000 0.000232 0.000514 0.003342 180.0 0.999649 0.000477 0.996658 0.999486 0.999768 1.000000 1.000000 180.0 9433.594444 3188.238987 2906.0 7428.00 9137.0 11047.25 19890.0 180.0 7147.744444 4107.915526 0.0 4499.50 6744.0 9800.75 19888.0 180.0 0.753268 0.325469 0.000000 0.492509 0.999487 0.999827 1.000000 180.0 0.752988 0.325337 0.000000 0.492493 0.998909 0.999569 1.000000 180.0 1.273580 0.272004 0.696537 1.125050 1.272578 1.412471 2.154478
IISNP11 160.0 0.353841 0.202656 -0.000288 0.366236 0.461146 0.482656 0.499608 180.0 9255.933333 3241.901390 2378.0 6706.75 9091.5 11623.50 21340.0 180.0 3975.122222 2559.271886 0.0 2446.25 4126.5 5703.25 13073.0 180.0 0.438361 0.227728 0.000000 0.469326 0.508612 0.537710 0.999584 180.0 0.438230 0.227680 0.000000 0.469088 0.508458 0.537675 0.999584 160.0 0.000333 0.000151 0.000132 0.000177 0.000384 0.000464 0.000634 180.0 0.366845 0.194554 0.0 0.411407 0.463635 0.482935 0.499915 180.0 0.366726 0.194490 0.0 0.411189 0.463530 0.482863 0.499746 180.0 3.383333 4.635634 0.0 0.00 2.0 4.00 29.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000360 0.000474 0.000000 0.000000 0.000219 0.000496 0.002338 180.0 0.999640 0.000474 0.997662 0.999504 0.999781 1.000000 1.000000 180.0 9252.550000 3240.552614 2378.0 6698.75 9090.0 11619.00 21337.0 180.0 5277.427778 3114.155545 3.0 3315.75 4718.0 6202.50 18030.0 180.0 0.561639 0.227728 0.000416 0.462290 0.491388 0.530674 1.000000 180.0 0.561411 0.227564 0.000416 0.462261 0.491157 0.530405 0.999914 180.0 1.247338 0.305772 0.608462 1.025405 1.274052 1.440906 2.427515
IISNP110 160.0 0.224297 0.142993 -0.000197 0.123057 0.180578 0.366186 0.468218 180.0 8333.394444 1816.263060 2651.0 7138.00 8543.5 9516.50 11862.0 180.0 3653.088889 2758.969952 496.0 1232.00 2428.5 5708.25 10926.0 180.0 0.437648 0.309234 0.087915 0.148591 0.286785 0.638655 1.000000 180.0 0.437558 0.309167 0.087884 0.148565 0.286691 0.638631 1.000000 160.0 0.000179 0.000018 0.000145 0.000165 0.000178 0.000191 0.000235 180.0 0.216521 0.136843 0.0 0.129422 0.172281 0.359865 0.468404 180.0 0.216477 0.136812 0.0 0.129419 0.172251 0.359823 0.468360 180.0 1.650000 1.832283 0.0 0.00 1.0 2.00 12.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000198 0.000214 0.000000 0.000000 0.000137 0.000281 0.001264 180.0 0.999802 0.000214 0.998736 0.999719 0.999863 1.000000 1.000000 180.0 8331.744444 1815.946749 2651.0 7137.75 8540.5 9516.25 11860.0 180.0 4678.655556 2795.183702 0.0 2825.00 4373.5 7034.75 10114.0 180.0 0.562352 0.309234 0.000000 0.361345 0.713215 0.851409 0.912085 180.0 0.562244 0.309180 0.000000 0.361332 0.712981 0.851170 0.911771 180.0 1.148689 0.194060 0.522676 1.020648 1.117630 1.281325 1.672398
IISNP111 160.0 0.126563 0.211624 -0.000202 0.000414 0.000995 0.439632 0.499187 180.0 9532.277778 2525.282163 3373.0 7866.75 9702.5 11076.75 16299.0 180.0 3936.405556 4088.812721 1.0 9.00 3666.0 6897.25 13976.0 180.0 0.418369 0.414248 0.000127 0.001062 0.494139 0.997692 1.000000 180.0 0.418092 0.414030 0.000127 0.001061 0.493804 0.997146 0.999806 160.0 0.000180 0.000018 0.000143 0.000166 0.000180 0.000192 0.000228 180.0 0.139084 0.217517 0.0 0.000619 0.001224 0.451048 0.499359 180.0 0.138948 0.217306 0.0 0.000619 0.001223 0.450920 0.499040 180.0 10.950000 11.078831 0.0 4.00 9.0 13.00 89.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001141 0.001091 0.000000 0.000457 0.000987 0.001429 0.006441 180.0 0.998859 0.001091 0.993559 0.998571 0.999013 0.999543 1.000000 180.0 9521.327778 2522.402235 3371.0 7852.25 9693.5 11061.25 16288.0 180.0 5584.922222 4260.466849 0.0 21.00 5723.5 9074.50 15745.0 180.0 0.581631 0.414248 0.000000 0.002308 0.505861 0.998938 0.999873 180.0 0.580767 0.413545 0.000000 0.002301 0.505519 0.997718 0.999356 180.0 1.303991 0.249423 0.691246 1.170493 1.302924 1.434603 2.371870
IISNP112 155.0 0.240413 0.239846 -0.000220 -0.000154 0.427726 0.480977 0.499477 180.0 5789.894444 2608.553514 2008.0 4167.50 5143.0 6612.00 17775.0 180.0 2817.255556 2404.026513 0.0 1509.75 2489.5 3860.25 14181.0 180.0 0.501489 0.338876 0.000000 0.462003 0.512233 0.555391 1.000000 180.0 0.497728 0.338564 0.000000 0.456136 0.507065 0.553678 1.000000 155.0 0.000179 0.000018 0.000147 0.000165 0.000179 0.000190 0.000228 180.0 0.260063 0.238637 0.0 0.000000 0.449871 0.482796 0.499883 180.0 0.256675 0.235507 0.0 0.000000 0.445636 0.476039 0.495664 180.0 75.050000 84.056796 0.0 9.75 47.0 111.00 462.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.012810 0.012994 0.000000 0.002100 0.009006 0.019791 0.062951 180.0 0.987190 0.012994 0.937049 0.980209 0.990994 0.997900 1.000000 180.0 5714.844444 2582.356664 2008.0 4166.00 5066.5 6456.50 17570.0 180.0 2897.588889 2670.817902 0.0 1469.75 2507.0 3726.50 17570.0 180.0 0.498511 0.338876 0.000000 0.444609 0.487767 0.537997 1.000000 180.0 0.489461 0.330756 0.000000 0.442829 0.481729 0.532477 0.998217 180.0 0.778958 0.254229 0.361506 0.627537 0.748189 0.827499 1.801782
IISNP113 160.0 0.255774 0.224149 -0.000235 0.000297 0.371636 0.467598 0.499104 180.0 5102.161111 1831.001338 1762.0 3786.25 4909.0 5973.75 11468.0 180.0 3213.566667 1938.577391 0.0 1930.00 2861.0 4149.75 11462.0 180.0 0.634540 0.292339 0.000000 0.471575 0.531607 0.999226 1.000000 180.0 0.634287 0.292273 0.000000 0.471137 0.531492 0.998875 1.000000 160.0 0.000180 0.000019 0.000144 0.000165 0.000178 0.000192 0.000235 180.0 0.268460 0.223057 0.0 0.000602 0.403549 0.468785 0.499858 180.0 0.268327 0.222947 0.0 0.000602 0.403158 0.468594 0.499575 180.0 2.377778 3.213372 0.0 0.00 1.0 3.00 17.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000446 0.000616 0.000000 0.000000 0.000257 0.000618 0.004832 180.0 0.999554 0.000616 0.995168 0.999382 0.999743 1.000000 1.000000 180.0 5099.783333 1829.780108 1762.0 3784.25 4905.5 5972.00 11465.0 180.0 1886.216667 1728.228144 0.0 4.00 1877.0 2927.50 8063.0 180.0 0.365460 0.292339 0.000000 0.000774 0.468393 0.528425 1.000000 180.0 0.365267 0.292170 0.000000 0.000774 0.468293 0.527682 1.000000 180.0 0.688216 0.159786 0.329136 0.575644 0.682324 0.783404 1.192800
IISNP114 152.0 0.283619 0.236432 -0.000199 0.000127 0.463544 0.485376 0.499796 180.0 5415.311111 1575.713708 2054.0 4488.00 5464.0 6525.50 10071.0 180.0 2900.738889 1965.717446 0.0 1759.00 2707.0 3724.75 8519.0 180.0 0.559781 0.318448 0.000000 0.476904 0.510611 0.998717 1.000000 180.0 0.539559 0.306524 0.000000 0.457473 0.491826 0.945357 0.976953 152.0 0.000181 0.000018 0.000143 0.000165 0.000180 0.000193 0.000235 180.0 0.280006 0.237351 0.0 0.000328 0.461309 0.485961 0.500000 180.0 0.270172 0.229014 0.0 0.000320 0.445709 0.469106 0.487755 180.0 189.061111 78.286479 18.0 133.75 178.5 231.25 520.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.034852 0.009885 0.005141 0.028879 0.033471 0.040029 0.068671 180.0 0.965148 0.009885 0.931329 0.959971 0.966529 0.971121 0.994859 180.0 5226.250000 1521.173352 1985.0 4309.00 5267.5 6236.75 9757.0 180.0 2325.511111 1993.110089 0.0 4.00 2305.0 3182.75 9299.0 180.0 0.440219 0.318448 0.000000 0.001283 0.489389 0.523096 1.000000 180.0 0.425590 0.308774 0.000000 0.001250 0.472320 0.506712 0.983843 180.0 0.740279 0.163076 0.387173 0.644253 0.752822 0.830810 1.372592
IISNP115 160.0 0.184351 0.221098 -0.000205 0.000256 0.001491 0.441303 0.498972 180.0 5109.288889 1699.845591 1527.0 3998.00 5093.0 6184.75 9315.0 180.0 3288.933333 2270.817161 1.0 1681.25 2815.0 4948.50 9054.0 180.0 0.641935 0.355274 0.000193 0.436544 0.498554 0.999555 1.000000 180.0 0.641012 0.354773 0.000193 0.434652 0.498050 0.997944 1.000000 160.0 0.000181 0.000018 0.000143 0.000165 0.000180 0.000193 0.000235 180.0 0.189342 0.222329 0.0 0.000435 0.001651 0.445857 0.499138 180.0 0.189066 0.222012 0.0 0.000435 0.001651 0.445258 0.498708 180.0 6.361111 5.807685 0.0 2.00 5.0 8.00 38.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001306 0.001436 0.000000 0.000493 0.001041 0.001635 0.013056 180.0 0.998694 0.001436 0.986944 0.998365 0.998959 0.999507 1.000000 180.0 5102.927778 1698.131754 1527.0 3991.00 5083.0 6178.25 9309.0 180.0 1813.994444 2071.952029 0.0 2.75 1613.0 3032.00 8379.0 180.0 0.358065 0.355274 0.000000 0.000445 0.501446 0.563456 0.999807 180.0 0.357682 0.355013 0.000000 0.000444 0.500940 0.561564 0.999502 180.0 0.697437 0.183592 0.277304 0.563650 0.708875 0.834627 1.055823
IISNP116 160.0 0.176409 0.234594 -0.000228 -0.000019 0.000267 0.482721 0.499755 180.0 12872.833333 3740.520173 5733.0 9864.00 12241.5 15384.75 24018.0 180.0 3412.288889 4848.772876 0.0 2.00 6.5 6311.00 19748.0 180.0 0.256790 0.332884 0.000000 0.000137 0.000462 0.503876 1.000000 180.0 0.256729 0.332809 0.000000 0.000137 0.000462 0.503803 0.999912 160.0 0.000180 0.000019 0.000143 0.000165 0.000179 0.000193 0.000228 180.0 0.156985 0.227984 0.0 0.000131 0.000360 0.480543 0.499956 180.0 0.156946 0.227927 0.0 0.000131 0.000360 0.480484 0.499913 180.0 3.394444 4.961863 0.0 0.00 2.0 4.00 45.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000261 0.000360 0.000000 0.000000 0.000179 0.000340 0.002830 180.0 0.999739 0.000360 0.997170 0.999660 0.999821 1.000000 1.000000 180.0 12869.438889 3739.505384 5733.0 9861.25 12236.5 15377.25 24014.0 180.0 9457.150000 5285.202619 0.0 5731.50 9336.0 12935.75 24008.0 180.0 0.743210 0.332884 0.000000 0.496124 0.999538 0.999863 1.000000 180.0 0.743009 0.332790 0.000000 0.496095 0.999049 0.999638 1.000000 180.0 1.744546 0.269751 1.226642 1.536823 1.700849 1.915374 2.732149
IISNP117 119.0 0.200824 0.171980 -0.000219 -0.000169 0.296247 0.348918 0.460519 180.0 2218.322222 1826.310001 41.0 870.00 1796.5 2877.50 12747.0 180.0 1697.544444 1714.996273 0.0 599.50 1243.0 2201.75 12739.0 180.0 0.705201 0.271694 0.000000 0.641042 0.677685 1.000000 1.000000 180.0 0.704398 0.271354 0.000000 0.640900 0.677685 0.997992 1.000000 119.0 0.000182 0.000019 0.000144 0.000167 0.000181 0.000198 0.000228 180.0 0.205988 0.170980 0.0 0.000000 0.292268 0.347778 0.493827 180.0 0.205770 0.170805 0.0 0.000000 0.291951 0.346930 0.493827 180.0 2.494444 4.701714 0.0 0.00 1.0 3.00 30.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001102 0.002185 0.000000 0.000000 0.000260 0.001336 0.019157 180.0 0.998898 0.002185 0.980843 0.998664 0.999740 1.000000 1.000000 180.0 2215.827778 1824.574097 41.0 870.00 1794.5 2876.75 12739.0 180.0 518.283333 628.857244 0.0 0.00 334.5 767.75 3049.0 180.0 0.294799 0.271694 0.000000 0.000000 0.322315 0.358958 1.000000 180.0 0.294500 0.271441 0.000000 0.000000 0.322289 0.358878 1.000000 180.0 0.290838 0.207394 0.009289 0.135746 0.260981 0.392547 1.257667
IISNP119 160.0 0.113933 0.202309 -0.000219 0.000175 0.001246 0.010852 0.499652 180.0 4371.794444 1796.355599 1680.0 2972.25 4083.5 5143.75 10067.0 180.0 2761.155556 2309.518177 0.0 933.25 2492.0 4267.25 10057.0 180.0 0.635774 0.412796 0.000000 0.458334 0.990855 0.999368 1.000000 180.0 0.635468 0.412616 0.000000 0.458197 0.990206 0.999016 1.000000 160.0 0.000180 0.000019 0.000143 0.000165 0.000180 0.000192 0.000235 180.0 0.117484 0.204456 0.0 0.000402 0.001467 0.014421 0.499817 180.0 0.117414 0.204333 0.0 0.000402 0.001466 0.014413 0.498938 180.0 2.055556 2.625024 0.0 0.00 2.0 3.00 12.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000484 0.000676 0.000000 0.000000 0.000327 0.000714 0.004813 180.0 0.999516 0.000676 0.995187 0.999286 0.999673 1.000000 1.000000 180.0 4369.738889 1795.690503 1680.0 2971.75 4080.0 5143.75 10067.0 180.0 1608.583333 2115.158105 0.0 2.00 30.0 2593.00 9559.0 180.0 0.364226 0.412796 0.000000 0.000632 0.009145 0.541666 1.000000 180.0 0.364048 0.412609 0.000000 0.000632 0.009138 0.541508 1.000000 180.0 0.590346 0.175735 0.262188 0.460229 0.578514 0.696433 1.018439
IISNP12 160.0 0.203271 0.229790 -0.001655 -0.000580 0.000318 0.460335 0.498155 180.0 11986.155556 3731.849284 2561.0 9216.00 12456.0 14491.00 24253.0 180.0 4690.688889 4687.140289 0.0 8.00 4888.0 7463.00 18316.0 180.0 0.375504 0.343214 0.000000 0.000750 0.489171 0.544849 0.999923 180.0 0.375373 0.343071 0.000000 0.000750 0.489015 0.544747 0.999688 160.0 0.001328 0.000289 0.000947 0.001083 0.001192 0.001589 0.002093 180.0 0.218901 0.232215 0.0 0.000624 0.001883 0.470008 0.499352 180.0 0.218840 0.232151 0.0 0.000624 0.001882 0.469930 0.499189 180.0 3.022222 4.989324 0.0 0.00 2.0 4.00 51.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000238 0.000339 0.000000 0.000000 0.000155 0.000320 0.003088 180.0 0.999762 0.000339 0.996912 0.999680 0.999845 1.000000 1.000000 180.0 11983.133333 3730.470287 2561.0 9216.00 12455.0 14487.75 24247.0 180.0 7292.444444 4768.617761 1.0 4417.75 6424.5 10899.00 19887.0 180.0 0.624496 0.343214 0.000077 0.455151 0.510829 0.999250 1.000000 180.0 0.624389 0.343194 0.000077 0.455031 0.510667 0.999122 1.000000 180.0 1.645180 0.425888 0.466536 1.401417 1.738667 1.925522 2.758881
IISNP120 160.0 0.321717 0.223181 -0.000186 0.011300 0.466261 0.487265 0.499465 180.0 11346.605556 4114.684608 2303.0 8024.25 11633.0 14081.25 23578.0 180.0 5907.311111 3885.934845 0.0 3437.25 5784.5 7737.75 20869.0 180.0 0.521028 0.278659 0.000000 0.462743 0.493972 0.522798 0.996974 180.0 0.520801 0.278510 0.000000 0.462394 0.493781 0.522653 0.995769 160.0 0.000179 0.000018 0.000143 0.000165 0.000180 0.000192 0.000228 180.0 0.328444 0.220227 0.0 0.011931 0.466439 0.487529 0.499644 180.0 0.328316 0.220140 0.0 0.011901 0.466349 0.487379 0.499644 180.0 4.622222 7.886170 0.0 1.00 2.0 5.00 55.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000413 0.000655 0.000000 0.000075 0.000245 0.000439 0.004523 180.0 0.999587 0.000655 0.995477 0.999561 0.999755 0.999925 1.000000 180.0 11341.983333 4113.451781 2303.0 8023.50 11620.5 14074.75 23574.0 180.0 5434.672222 3908.457938 38.0 3026.75 5734.0 7368.00 23559.0 180.0 0.478972 0.278659 0.003026 0.477202 0.506028 0.537257 1.000000 180.0 0.478786 0.278552 0.003022 0.477070 0.505784 0.537019 1.000000 180.0 1.512790 0.334655 0.568931 1.295514 1.553277 1.717388 2.504987
IISNP121 160.0 0.230037 0.239837 -0.000203 0.000026 0.000835 0.480656 0.499543 180.0 5666.061111 1798.642813 1213.0 4133.00 5712.0 6753.50 12019.0 180.0 3202.677778 2419.009827 0.0 1675.25 2912.0 4259.00 12013.0 180.0 0.546977 0.337677 0.000000 0.463072 0.503056 0.999185 1.000000 180.0 0.546771 0.337573 0.000000 0.463013 0.502864 0.998742 1.000000 160.0 0.000180 0.000018 0.000143 0.000167 0.000179 0.000192 0.000228 180.0 0.257492 0.238969 0.0 0.000271 0.447425 0.484446 0.499733 180.0 0.257381 0.238868 0.0 0.000271 0.447020 0.484422 0.499702 180.0 2.250000 3.318940 0.0 0.00 1.0 3.00 22.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000388 0.000558 0.000000 0.000000 0.000246 0.000506 0.003542 180.0 0.999612 0.000558 0.996458 0.999494 0.999754 1.000000 1.000000 180.0 5663.811111 1797.914806 1213.0 4130.50 5710.0 6747.50 12014.0 180.0 2461.133333 2013.771820 0.0 4.00 2531.5 3725.50 8539.0 180.0 0.453023 0.337677 0.000000 0.000815 0.496944 0.536928 1.000000 180.0 0.452841 0.337554 0.000000 0.000815 0.496544 0.536858 1.000000 180.0 0.762796 0.138429 0.247512 0.662694 0.753426 0.849815 1.198055
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IISNP92 160.0 0.378315 0.183494 -0.001300 0.362222 0.471235 0.486433 0.498821 180.0 9237.922222 2923.567193 3609.0 7300.25 8809.0 10815.50 18937.0 180.0 4085.794444 2413.020495 0.0 2935.75 4194.0 5388.75 11819.0 180.0 0.435142 0.216945 0.000000 0.458972 0.508324 0.526865 0.999558 180.0 0.435079 0.216911 0.000000 0.458913 0.508170 0.526716 0.999523 160.0 0.001402 0.000324 0.000838 0.001062 0.001497 0.001687 0.002116 180.0 0.374536 0.188324 0.0 0.362854 0.472018 0.487337 0.499895 180.0 0.374483 0.188298 0.0 0.362816 0.471988 0.487166 0.499895 180.0 1.316667 1.676239 0.0 0.00 1.0 2.00 9.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000144 0.000192 0.000000 0.000000 0.000103 0.000216 0.001127 180.0 0.999856 0.000192 0.998873 0.999784 0.999897 1.000000 1.000000 180.0 9236.605556 2923.243283 3607.0 7297.75 8809.0 10813.50 18935.0 180.0 5150.811111 2358.185165 3.0 3615.25 4608.0 6321.00 13670.0 180.0 0.564858 0.216945 0.000442 0.473135 0.491676 0.541028 1.000000 180.0 0.564777 0.216911 0.000442 0.473001 0.491567 0.540959 1.000000 180.0 1.252187 0.241363 0.644183 1.085005 1.214423 1.345689 2.013212
IISNP93 160.0 0.096555 0.193329 -0.000213 -0.000040 0.000234 0.001306 0.499176 180.0 8362.950000 3718.250442 2522.0 6152.00 7626.5 9585.75 24428.0 180.0 3455.655556 4077.875800 0.0 2.00 2067.5 6591.00 21794.0 180.0 0.419548 0.431382 0.000000 0.000266 0.464619 0.999185 1.000000 180.0 0.419224 0.431120 0.000000 0.000265 0.464196 0.998316 1.000000 160.0 0.000180 0.000017 0.000144 0.000165 0.000180 0.000192 0.000220 180.0 0.112139 0.203278 0.0 0.000133 0.000427 0.001754 0.499325 180.0 0.111993 0.203013 0.0 0.000133 0.000427 0.001749 0.498905 180.0 12.094444 14.866143 0.0 4.00 9.0 16.00 130.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.001546 0.002228 0.000000 0.000601 0.001095 0.001773 0.019608 180.0 0.998454 0.002228 0.980392 0.998227 0.998905 0.999399 1.000000 180.0 8350.855556 3715.931131 2522.0 6147.75 7623.0 9566.75 24412.0 180.0 4895.200000 4590.891731 0.0 6.00 4554.5 7980.75 21693.0 180.0 0.580452 0.431382 0.000000 0.000815 0.535381 0.999734 1.000000 180.0 0.579230 0.430367 0.000000 0.000815 0.534982 0.997876 0.999775 180.0 1.192295 0.667759 0.433076 0.857340 1.006292 1.165251 4.202729
IISNP94 160.0 0.144808 0.221907 -0.000235 -0.000146 0.000196 0.469044 0.499750 180.0 13327.183333 3591.671675 5230.0 10579.25 13023.0 15513.75 24616.0 180.0 4425.433333 5543.325841 0.0 0.00 7.5 7599.75 21007.0 180.0 0.336372 0.389649 0.000000 0.000000 0.000593 0.527868 1.000000 180.0 0.336308 0.389575 0.000000 0.000000 0.000593 0.527818 1.000000 160.0 0.000180 0.000019 0.000145 0.000165 0.000180 0.000192 0.000235 180.0 0.139585 0.219375 0.0 0.000000 0.000319 0.468182 0.499936 180.0 0.139558 0.219332 0.0 0.000000 0.000319 0.467968 0.499807 180.0 3.088889 4.700278 0.0 0.00 2.0 4.00 47.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000222 0.000285 0.000000 0.000000 0.000160 0.000320 0.002604 180.0 0.999778 0.000285 0.997396 0.999680 0.999840 1.000000 1.000000 180.0 13324.094444 3590.181400 5228.0 10578.50 13022.0 15508.25 24606.0 180.0 8898.661111 6037.491159 0.0 4694.75 8911.0 13404.75 24606.0 180.0 0.663628 0.389649 0.000000 0.472132 0.999407 1.000000 1.000000 180.0 0.663471 0.389548 0.000000 0.472087 0.998654 0.999684 1.000000 180.0 1.813141 0.263887 0.856835 1.648142 1.798063 1.933380 2.793386
IISNP95 160.0 0.180296 0.233453 -0.000219 -0.000162 0.000417 0.475961 0.498911 180.0 4519.000000 1473.212220 1524.0 3482.00 4304.0 5470.25 9675.0 180.0 2338.805556 1861.239775 0.0 3.00 2363.5 3485.25 7397.0 180.0 0.526038 0.383940 0.000000 0.000863 0.497595 0.999345 1.000000 180.0 0.525691 0.383798 0.000000 0.000863 0.497071 0.998674 1.000000 160.0 0.000180 0.000018 0.000144 0.000166 0.000180 0.000192 0.000220 180.0 0.197666 0.237013 0.0 0.000000 0.000711 0.478295 0.499098 180.0 0.197455 0.236761 0.0 0.000000 0.000710 0.478111 0.499016 180.0 4.177778 4.192512 0.0 1.00 3.0 6.00 28.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000924 0.000957 0.000000 0.000295 0.000765 0.001242 0.006929 180.0 0.999076 0.000957 0.993071 0.998758 0.999235 0.999705 1.000000 180.0 4514.822222 1471.995313 1524.0 3481.00 4303.5 5463.25 9663.0 180.0 2176.016667 1955.149626 0.0 2.00 2149.5 3379.75 9663.0 180.0 0.473962 0.383940 0.000000 0.000655 0.502405 0.999137 1.000000 180.0 0.473385 0.383433 0.000000 0.000655 0.501876 0.996260 0.999757 180.0 0.619315 0.164257 0.255157 0.512317 0.605839 0.706676 1.121069
IISNP96 160.0 0.230205 0.240125 -0.000235 -0.000090 0.000270 0.480335 0.499127 180.0 14398.200000 3465.611056 2004.0 12156.00 14337.5 16509.50 24696.0 180.0 9720.805556 4802.088116 1.0 6902.25 8741.0 13414.50 24694.0 180.0 0.686304 0.299491 0.000046 0.503941 0.534759 0.999883 1.000000 180.0 0.686168 0.299460 0.000046 0.503831 0.534611 0.999761 1.000000 160.0 0.000182 0.000019 0.000144 0.000166 0.000181 0.000196 0.000235 180.0 0.242399 0.240559 0.0 0.000099 0.429980 0.484485 0.499313 180.0 0.242334 0.240495 0.0 0.000099 0.429928 0.484444 0.499254 180.0 3.216667 3.909986 0.0 0.00 2.0 4.00 26.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000223 0.000273 0.000000 0.000000 0.000152 0.000295 0.001805 180.0 0.999777 0.000273 0.998195 0.999705 0.999848 1.000000 1.000000 180.0 14394.983333 3465.135915 2004.0 12155.25 14336.5 16505.00 24694.0 180.0 4674.177778 4743.994449 0.0 2.00 5414.0 7816.00 21640.0 180.0 0.313696 0.299491 0.000000 0.000117 0.465241 0.496059 0.999954 180.0 0.313608 0.299402 0.000000 0.000117 0.465113 0.495951 0.999935 180.0 1.977333 0.313715 0.228981 1.784816 1.985249 2.207706 2.810467
IISNP97 160.0 0.198572 0.216164 -0.000184 0.000446 0.001765 0.426840 0.499486 180.0 11215.211111 3610.441266 2900.0 8578.00 10846.0 13400.00 23324.0 180.0 3849.744444 3800.119357 0.0 8.00 3735.5 5719.50 16304.0 180.0 0.348734 0.317645 0.000000 0.000807 0.360270 0.510560 0.999513 180.0 0.348485 0.317387 0.000000 0.000806 0.360128 0.510389 0.999116 160.0 0.000179 0.000018 0.000143 0.000166 0.000178 0.000191 0.000228 180.0 0.223019 0.216242 0.0 0.000677 0.328228 0.454022 0.499698 180.0 0.222877 0.216106 0.0 0.000676 0.328030 0.453841 0.499498 180.0 7.422222 6.245406 0.0 3.00 6.0 10.00 43.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000659 0.000527 0.000000 0.000326 0.000517 0.000882 0.003420 180.0 0.999341 0.000527 0.996580 0.999118 0.999483 0.999674 1.000000 180.0 11207.788889 3608.203169 2899.0 8569.75 10842.0 13394.00 23321.0 180.0 7358.044444 4560.188072 6.0 4444.25 6670.5 10633.25 22631.0 180.0 0.651266 0.317645 0.000487 0.489440 0.639730 0.999193 1.000000 180.0 0.650856 0.317449 0.000486 0.489087 0.639478 0.998441 1.000000 180.0 1.508114 0.257719 0.744155 1.319080 1.527237 1.675380 2.355646
IISNP98 160.0 0.276461 0.217102 -0.000198 0.000469 0.421802 0.459635 0.499489 180.0 7640.716667 1898.320641 3435.0 6257.25 7660.0 9013.00 12288.0 180.0 4376.588889 2704.935420 1.0 2864.75 4267.5 5502.50 12284.0 180.0 0.573608 0.308256 0.000122 0.492447 0.542010 0.997101 1.000000 180.0 0.573489 0.308203 0.000122 0.492241 0.541940 0.996791 1.000000 160.0 0.000181 0.000019 0.000143 0.000166 0.000179 0.000193 0.000235 180.0 0.271935 0.219468 0.0 0.000627 0.421979 0.461356 0.499669 180.0 0.271873 0.219417 0.0 0.000627 0.421902 0.461277 0.499614 180.0 1.788889 2.608514 0.0 0.00 1.0 2.00 21.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000224 0.000286 0.000000 0.000000 0.000164 0.000291 0.001928 180.0 0.999776 0.000286 0.998072 0.999709 0.999836 1.000000 1.000000 180.0 7638.927778 1897.532862 3434.0 6255.50 7660.0 9008.75 12287.0 180.0 3262.338889 2544.570024 0.0 25.25 3378.5 4593.75 10221.0 180.0 0.426392 0.308256 0.000000 0.002899 0.457990 0.507553 0.999878 180.0 0.426287 0.308172 0.000000 0.002899 0.457930 0.507341 0.999878 180.0 1.041497 0.135165 0.798011 0.937487 1.033364 1.142928 1.527022
IISNP99 160.0 0.251175 0.239850 -0.000219 0.000081 0.446573 0.481980 0.499796 180.0 10246.255556 2451.692673 4392.0 8259.50 10374.5 12106.50 15518.0 180.0 5595.816667 3788.073282 0.0 3582.25 5587.0 7554.25 14999.0 180.0 0.545541 0.343848 0.000000 0.467842 0.507171 0.999380 1.000000 180.0 0.545351 0.343718 0.000000 0.467742 0.506945 0.998794 1.000000 160.0 0.000180 0.000018 0.000144 0.000166 0.000178 0.000191 0.000220 180.0 0.250398 0.240141 0.0 0.000265 0.446758 0.483118 0.499947 180.0 0.250317 0.240064 0.0 0.000265 0.446652 0.483017 0.499894 180.0 3.694444 3.812794 0.0 1.00 3.0 5.00 20.0 0.0 NaN NaN NaN NaN NaN NaN NaN 180.0 0.000352 0.000396 0.000000 0.000077 0.000286 0.000469 0.003030 180.0 0.999648 0.000396 0.996970 0.999531 0.999714 0.999923 1.000000 180.0 10242.561111 2450.454429 4392.0 8254.25 10373.5 12101.75 15515.0 180.0 4646.744444 3671.428355 0.0 5.75 5042.5 6669.25 14556.0 180.0 0.454459 0.343848 0.000000 0.000620 0.492829 0.532158 1.000000 180.0 0.454297 0.343713 0.000000 0.000620 0.492634 0.532044 1.000000 180.0 1.402202 0.202970 0.819258 1.261200 1.417866 1.531932 1.895755
IISNP118 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP141 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP153 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP155 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP18 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP183 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP201 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP220 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP223 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP240 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP280 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP33 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP37 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP44 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP5 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP61 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
IISNP77 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN

282 rows × 136 columns

In [101]:
AV_SNP_stats.to_csv('AV_SNP_error_background(+more)_general_stats.csv')
In [25]:
AV_SNP_stats.columns
Out[25]:
MultiIndex(levels=[['ADJUSTEDFREQUENCY', 'ALL_READS', 'ALT_COUNT', 'ALT_FREQ', 'ALT_FREQ_TOTAL', 'BACKGROUND', 'DONORFREQUENCY', 'DONORFREQUENCYTOTAL', 'ERR_COUNT', 'ERR_FREQ_FIXED', 'ERR_FREQ_TOTAL', 'REFALTFRACTION', 'REF_ALT_READS', 'REF_COUNT', 'REF_FREQ', 'REF_FREQ_TOTAL', 'RELATIVE_COVERAGE'], ['count', 'mean', 'std', 'min', '25%', '50%', '75%', 'max']],
           labels=[[0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 4, 4, 4, 5, 5, 5, 5, 5, 5, 5, 5, 6, 6, 6, 6, 6, 6, 6, 6, 7, 7, 7, 7, 7, 7, 7, 7, 8, 8, 8, 8, 8, 8, 8, 8, 9, 9, 9, 9, 9, 9, 9, 9, 10, 10, 10, 10, 10, 10, 10, 10, 11, 11, 11, 11, 11, 11, 11, 11, 12, 12, 12, 12, 12, 12, 12, 12, 13, 13, 13, 13, 13, 13, 13, 13, 14, 14, 14, 14, 14, 14, 14, 14, 15, 15, 15, 15, 15, 15, 15, 15, 16, 16, 16, 16, 16, 16, 16, 16], [0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 4, 5, 6, 7]])
In [40]:
help(pd.DataFrame.nlargest)

Help on function nlargest in module pandas.core.frame:

nlargest(self, n, columns, keep='first')
    Get the rows of a DataFrame sorted by the `n` largest
    values of `columns`.
    
    .. versionadded:: 0.17.0
    
    Parameters
    ----------
    n : int
        Number of items to retrieve
    columns : list or str
        Column name or names to order by
    keep : {'first', 'last', False}, default 'first'
        Where there are duplicate values:
        - ``first`` : take the first occurrence.
        - ``last`` : take the last occurrence.
    
    Returns
    -------
    DataFrame
    
    Examples
    --------
    >>> df = DataFrame({'a': [1, 10, 8, 11, -1],
    ...                 'b': list('abdce'),
    ...                 'c': [1.0, 2.0, np.nan, 3.0, 4.0]})
    >>> df.nlargest(3, 'a')
        a  b   c
    3  11  c   3
    1  10  b   2
    2   8  d NaN
In [44]:
AV_SNP_stats.BACKGROUND.nlargest(20, columns=['mean']).drop(['count'],axis=1).iplot(kind='bar', title="AV Blanks - Background stats", 
                                        theme='ggplot', logy=False, orientation='horizontal', sortbars=True,)

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/cufflinks/plotlytools.py:123: FutureWarning:

sort is deprecated, use sort_values(inplace=True) for INPLACE sorting
In [45]:
AV_SNP_stats.BACKGROUND.describe()
Out[45]:
count mean std min 25% 50% 75% max
count 265.000000 258.000000 256.000000 258.000000 258.000000 258.000000 258.000000 258.000000
mean 143.649057 0.000421 0.000075 0.000294 0.000362 0.000412 0.000473 0.000606
std 41.298725 0.000464 0.000105 0.000296 0.000385 0.000454 0.000540 0.000715
min 0.000000 0.000167 0.000016 0.000121 0.000153 0.000162 0.000167 0.000167
25% 157.000000 0.000179 0.000018 0.000143 0.000165 0.000179 0.000191 0.000220
50% 160.000000 0.000180 0.000019 0.000144 0.000166 0.000180 0.000193 0.000235
75% 160.000000 0.000271 0.000036 0.000148 0.000174 0.000202 0.000330 0.000435
max 160.000000 0.001575 0.000337 0.001055 0.001496 0.001606 0.001750 0.002116
In [47]:
AV_SNP_stats.ADJUSTEDFREQUENCY.nlargest(20, columns=['mean']).drop(['count'],axis=1).iplot(kind='bar', title="AV Blanks - AdjFreq stats", 
                                        theme='ggplot', logy=False, orientation='horizontal', sortbars=True,)

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/cufflinks/plotlytools.py:123: FutureWarning:

sort is deprecated, use sort_values(inplace=True) for INPLACE sorting
In [48]:
AV_SNP_stats.ADJUSTEDFREQUENCY.nsmallest(20, columns=['mean']).drop(['count'],axis=1).iplot(kind='bar', title="AV Blanks - AdjFreq stats", 
                                        theme='ggplot', logy=False, orientation='horizontal', sortbars=True,)

/Users/jcollins-macbook/anaconda3/lib/python3.6/site-packages/cufflinks/plotlytools.py:123: FutureWarning:

sort is deprecated, use sort_values(inplace=True) for INPLACE sorting
In [49]:
AV_SNP_stats.ADJUSTEDFREQUENCY.describe()
Out[49]:
count mean std min 25% 50% 75% max
count 265.000000 258.000000 256.000000 258.000000 258.000000 258.000000 258.000000 258.000000
mean 143.649057 0.205619 0.209457 0.001465 0.020342 0.159086 0.408443 0.480898
std 41.298725 0.079875 0.039569 0.030894 0.081386 0.201397 0.136541 0.077068
min 0.000000 -0.000167 0.000301 -0.002116 -0.001414 -0.001006 -0.000167 -0.000167
25% 157.000000 0.151772 0.202986 -0.000349 -0.000167 0.000317 0.426659 0.497523
50% 160.000000 0.206468 0.220219 -0.000219 0.000023 0.001235 0.464285 0.498968
75% 160.000000 0.251562 0.231617 -0.000210 0.000325 0.409708 0.480335 0.499542
max 160.000000 0.495494 0.242007 0.495494 0.495494 0.495494 0.495494 0.499840
In [ ]: